Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PKP4Q99569 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.24■□□□□ 0.35
PKP4Q99569 KRT17P6-201ENST00000453795 1220 ntBASIC17.24■□□□□ 0.35
PKP4Q99569 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
PKP4Q99569 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.24■□□□□ 0.35
PKP4Q99569 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.24■□□□□ 0.35
PKP4Q99569 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.24■□□□□ 0.35
PKP4Q99569 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PKP4Q99569 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.24■□□□□ 0.35
PKP4Q99569 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PKP4Q99569 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PKP4Q99569 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.23■□□□□ 0.35
PKP4Q99569 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.23■□□□□ 0.35
PKP4Q99569 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
PKP4Q99569 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.23■□□□□ 0.35
PKP4Q99569 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.23■□□□□ 0.35
PKP4Q99569 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 COX5BP2-201ENST00000392354 334 ntBASIC17.23■□□□□ 0.35
PKP4Q99569 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.23■□□□□ 0.35
PKP4Q99569 AC074051.2-201ENST00000565115 352 ntBASIC17.23■□□□□ 0.35
PKP4Q99569 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.23■□□□□ 0.35
PKP4Q99569 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.23■□□□□ 0.35
PKP4Q99569 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.23■□□□□ 0.35
PKP4Q99569 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.23■□□□□ 0.35
PKP4Q99569 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PKP4Q99569 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PKP4Q99569 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PKP4Q99569 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.23■□□□□ 0.35
PKP4Q99569 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 LINC00304-203ENST00000565008 1864 ntBASIC17.22■□□□□ 0.35
PKP4Q99569 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 NSUN5P1-202ENST00000421140 1535 ntBASIC17.22■□□□□ 0.35
PKP4Q99569 NSUN5P2-203ENST00000457352 1529 ntBASIC17.22■□□□□ 0.35
PKP4Q99569 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.22■□□□□ 0.35
PKP4Q99569 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PKP4Q99569 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PKP4Q99569 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 IGHV3-47-201ENST00000425060 335 ntBASIC17.22■□□□□ 0.35
PKP4Q99569 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.22■□□□□ 0.35
PKP4Q99569 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.22■□□□□ 0.35
PKP4Q99569 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PKP4Q99569 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.22■□□□□ 0.35
PKP4Q99569 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PKP4Q99569 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PKP4Q99569 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PKP4Q99569 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.21■□□□□ 0.35
PKP4Q99569 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.21■□□□□ 0.35
PKP4Q99569 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PKP4Q99569 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PKP4Q99569 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.21■□□□□ 0.35
PKP4Q99569 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PKP4Q99569 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.21■□□□□ 0.35
PKP4Q99569 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PKP4Q99569 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms