Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 SIGLEC16-201ENST00000599858 1437 ntBASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 AC073621.1-201ENST00000392730 636 ntBASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 AL020989.1-201ENST00000422979 469 ntBASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 KRT18P27-201ENST00000427733 1299 ntBASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 KRT18P3-201ENST00000451602 1288 ntBASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCDC85AQ96PX6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 MIR1233-2-201ENST00000408138 82 ntBASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 MIR1233-1-201ENST00000408722 82 ntBASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 NMU-202ENST00000505262 693 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC21.9■■□□□ 1.1
CCDC85AQ96PX6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CCDC85AQ96PX6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 KLF4P1-201ENST00000412782 1185 ntBASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 AC006504.4-201ENST00000592118 1568 ntBASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.89■■□□□ 1.09
CCDC85AQ96PX6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC85AQ96PX6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.88■■□□□ 1.09
CCDC85AQ96PX6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC85AQ96PX6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC85AQ96PX6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCDC85AQ96PX6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms