Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AC012640.2-201ENST00000561606 901 ntBASIC14.39□□□□□ -0.11
ZNF48Q96MX3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
ZNF48Q96MX3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 ZNF259P1-201ENST00000407656 1365 ntBASIC14.38□□□□□ -0.11
ZNF48Q96MX3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 AC092865.5-201ENST00000545435 363 ntBASIC14.38□□□□□ -0.11
ZNF48Q96MX3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 TERC-201ENST00000602385 541 ntBASIC14.38□□□□□ -0.11
ZNF48Q96MX3 AC025062.2-201ENST00000605477 670 ntBASIC14.38□□□□□ -0.11
ZNF48Q96MX3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF48Q96MX3 ESPNP-201ENST00000270691 2015 ntBASIC14.37□□□□□ -0.11
ZNF48Q96MX3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 AC007967.3-201ENST00000434308 558 ntBASIC14.37□□□□□ -0.11
ZNF48Q96MX3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 AC092910.1-201ENST00000482027 1129 ntBASIC14.37□□□□□ -0.11
ZNF48Q96MX3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 IGHV3-22-201ENST00000520721 359 ntBASIC14.37□□□□□ -0.11
ZNF48Q96MX3 OR7E14P-202ENST00000530490 1290 ntBASIC14.37□□□□□ -0.11
ZNF48Q96MX3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 NKAPP1-205ENST00000585790 367 ntBASIC14.37□□□□□ -0.11
ZNF48Q96MX3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZNF48Q96MX3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms