Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CHMP6Q96FZ7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHMP6Q96FZ7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CHMP6Q96FZ7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CHMP6Q96FZ7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 AC103702.1-201ENST00000548801 2630 ntBASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 AC133681.1-201ENST00000465482 601 ntBASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 RPPH1-201ENST00000516869 333 ntBASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CHMP6Q96FZ7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms