Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 NUS1P1-201ENST00000446295 882 ntBASIC18.26■□□□□ 0.51
IFT43Q96FT9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 PRELID1P1-202ENST00000567272 903 ntBASIC18.26■□□□□ 0.51
IFT43Q96FT9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 AC004263.2-201ENST00000617183 678 ntBASIC18.26■□□□□ 0.51
IFT43Q96FT9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IFT43Q96FT9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.26■□□□□ 0.51
IFT43Q96FT9 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 AC022898.2-201ENST00000616822 1312 ntBASIC18.25■□□□□ 0.51
IFT43Q96FT9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 LINC00167-201ENST00000530583 1419 ntBASIC18.25■□□□□ 0.51
IFT43Q96FT9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 IGHGP-201ENST00000390555 1178 ntBASIC18.25■□□□□ 0.51
IFT43Q96FT9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 AP002414.4-201ENST00000589764 1148 ntBASIC18.25■□□□□ 0.51
IFT43Q96FT9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 GPR32P1-201ENST00000601788 811 ntBASIC18.25■□□□□ 0.51
IFT43Q96FT9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
IFT43Q96FT9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IFT43Q96FT9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 AC026396.1-201ENST00000419388 421 ntBASIC18.24■□□□□ 0.51
IFT43Q96FT9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 DRAXINP1-201ENST00000437611 948 ntBASIC18.24■□□□□ 0.51
IFT43Q96FT9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.24■□□□□ 0.51
IFT43Q96FT9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IFT43Q96FT9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms