Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 AL353692.3-201ENST00000407031 1396 ntBASIC21.04■□□□□ 0.96
DDX11Q96FC9 AC006116.8-202ENST00000587620 1550 ntBASIC21.04■□□□□ 0.96
DDX11Q96FC9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
DDX11Q96FC9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DDX11Q96FC9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 AL031008.1-201ENST00000619963 541 ntBASIC21.03■□□□□ 0.96
DDX11Q96FC9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.03■□□□□ 0.96
DDX11Q96FC9 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DDX11Q96FC9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 AC106820.2-201ENST00000563775 3264 ntBASIC21.02■□□□□ 0.96
DDX11Q96FC9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 VENTXP7-201ENST00000475503 772 ntBASIC21.02■□□□□ 0.96
DDX11Q96FC9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.02■□□□□ 0.96
DDX11Q96FC9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX11Q96FC9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
DDX11Q96FC9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
DDX11Q96FC9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
DDX11Q96FC9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.02■□□□□ 0.95
DDX11Q96FC9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 KRT89P-201ENST00000620027 1478 ntBASIC21.01■□□□□ 0.95
DDX11Q96FC9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 AC009078.2-202ENST00000463353 338 ntBASIC21.01■□□□□ 0.95
DDX11Q96FC9 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 RN7SL606P-201ENST00000472779 293 ntBASIC21.01■□□□□ 0.95
DDX11Q96FC9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX11Q96FC9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 AL160237.2-201ENST00000556165 472 ntBASIC21.01■□□□□ 0.95
DDX11Q96FC9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX11Q96FC9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms