Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCAMP4Q969E2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 AC006116.8-202ENST00000587620 1550 ntBASIC17.57■□□□□ 0.4
SCAMP4Q969E2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 ABCD1P5-201ENST00000445663 754 ntBASIC17.57■□□□□ 0.4
SCAMP4Q969E2 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 AL031008.1-201ENST00000619963 541 ntBASIC17.57■□□□□ 0.4
SCAMP4Q969E2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCAMP4Q969E2 REXO1L11P-201ENST00000620964 1927 ntBASIC17.57■□□□□ 0.4
SCAMP4Q969E2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 SLC25A6P5-201ENST00000435663 894 ntBASIC17.56■□□□□ 0.4
SCAMP4Q969E2 FAAHP1-202ENST00000446499 1238 ntBASIC17.56■□□□□ 0.4
SCAMP4Q969E2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 AC106795.1-205ENST00000512851 1056 ntBASIC17.56■□□□□ 0.4
SCAMP4Q969E2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SCAMP4Q969E2 AP005117.1-201ENST00000584346 1413 ntBASIC17.55■□□□□ 0.4
SCAMP4Q969E2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 AL049757.1-201ENST00000616842 1596 ntBASIC17.55■□□□□ 0.4
SCAMP4Q969E2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 AC103564.2-201ENST00000432853 1299 ntBASIC17.55■□□□□ 0.4
SCAMP4Q969E2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 MTDHP3-201ENST00000594186 672 ntBASIC17.55■□□□□ 0.4
SCAMP4Q969E2 AC008608.2-201ENST00000606089 416 ntBASIC17.55■□□□□ 0.4
SCAMP4Q969E2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 KRT8P10-201ENST00000450021 1447 ntBASIC17.55■□□□□ 0.4
SCAMP4Q969E2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.55■□□□□ 0.4
SCAMP4Q969E2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SCAMP4Q969E2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms