Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.28■□□□□ 0.04
USP9XQ93008 FAM8A2P-201ENST00000528813 1142 ntBASIC15.28■□□□□ 0.04
USP9XQ93008 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.28■□□□□ 0.04
USP9XQ93008 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 AC019129.2-201ENST00000609837 1235 ntBASIC15.28■□□□□ 0.04
USP9XQ93008 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.28■□□□□ 0.04
USP9XQ93008 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.28■□□□□ 0.04
USP9XQ93008 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 PI4KAP1-204ENST00000612579 1703 ntBASIC15.28■□□□□ 0.04
USP9XQ93008 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.28■□□□□ 0.04
USP9XQ93008 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.28■□□□□ 0.04
USP9XQ93008 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 PTCHD3P3-201ENST00000403073 906 ntBASIC15.28■□□□□ 0.04
USP9XQ93008 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.28■□□□□ 0.04
USP9XQ93008 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
USP9XQ93008 AC243562.1-201ENST00000560672 389 ntBASIC15.28■□□□□ 0.04
USP9XQ93008 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
USP9XQ93008 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.28■□□□□ 0.04
USP9XQ93008 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
USP9XQ93008 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP9XQ93008 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
USP9XQ93008 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP9XQ93008 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP9XQ93008 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.27■□□□□ 0.04
USP9XQ93008 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
USP9XQ93008 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.27■□□□□ 0.04
USP9XQ93008 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP9XQ93008 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
USP9XQ93008 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP9XQ93008 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
USP9XQ93008 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.27■□□□□ 0.04
USP9XQ93008 CXCL1P1-201ENST00000502804 216 ntBASIC15.27■□□□□ 0.04
USP9XQ93008 FAM86C2P-203ENST00000528684 1004 ntBASIC15.27■□□□□ 0.04
USP9XQ93008 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.27■□□□□ 0.04
USP9XQ93008 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.27■□□□□ 0.04
USP9XQ93008 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.27■□□□□ 0.04
USP9XQ93008 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.27■□□□□ 0.04
USP9XQ93008 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.27■□□□□ 0.04
USP9XQ93008 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.27■□□□□ 0.04
USP9XQ93008 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.27■□□□□ 0.04
USP9XQ93008 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
USP9XQ93008 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.27■□□□□ 0.03
USP9XQ93008 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP9XQ93008 GNAS-203ENST00000306120 1878 ntBASIC15.27■□□□□ 0.03
USP9XQ93008 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP9XQ93008 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP9XQ93008 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP9XQ93008 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
USP9XQ93008 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
USP9XQ93008 AKAP8P1-201ENST00000434743 1349 ntBASIC15.27■□□□□ 0.03
USP9XQ93008 TSSK5P-201ENST00000423978 907 ntBASIC15.27■□□□□ 0.03
USP9XQ93008 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
USP9XQ93008 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
USP9XQ93008 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.27■□□□□ 0.03
USP9XQ93008 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.27■□□□□ 0.03
USP9XQ93008 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.27■□□□□ 0.03
USP9XQ93008 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP9XQ93008 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
USP9XQ93008 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.26■□□□□ 0.03
USP9XQ93008 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.26■□□□□ 0.03
USP9XQ93008 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.26■□□□□ 0.03
USP9XQ93008 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
USP9XQ93008 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.26■□□□□ 0.03
USP9XQ93008 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.26■□□□□ 0.03
USP9XQ93008 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
USP9XQ93008 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.26■□□□□ 0.03
USP9XQ93008 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
USP9XQ93008 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms