Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 LINC00265-3P-201ENST00000447588 903 ntBASIC17.94■□□□□ 0.46
PTCD2Q8WV60 TOB2P1-201ENST00000469761 992 ntBASIC17.94■□□□□ 0.46
PTCD2Q8WV60 RN7SL606P-201ENST00000472779 293 ntBASIC17.94■□□□□ 0.46
PTCD2Q8WV60 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 AL592071.1-201ENST00000611956 408 ntBASIC17.94■□□□□ 0.46
PTCD2Q8WV60 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PTCD2Q8WV60 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 DRAXINP1-201ENST00000437611 948 ntBASIC17.93■□□□□ 0.46
PTCD2Q8WV60 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 KRT126P-201ENST00000549467 1181 ntBASIC17.93■□□□□ 0.46
PTCD2Q8WV60 AP005901.3-202ENST00000581653 237 ntBASIC17.93■□□□□ 0.46
PTCD2Q8WV60 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 IGHV3-41-201ENST00000613121 348 ntBASIC17.93■□□□□ 0.46
PTCD2Q8WV60 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PTCD2Q8WV60 HTR7P1-202ENST00000624664 4411 ntBASIC17.92■□□□□ 0.46
PTCD2Q8WV60 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 AP000867.3-201ENST00000524675 377 ntBASIC17.92■□□□□ 0.46
PTCD2Q8WV60 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 AC124864.1-201ENST00000623408 392 ntBASIC17.92■□□□□ 0.46
PTCD2Q8WV60 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTCD2Q8WV60 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCD2Q8WV60 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCD2Q8WV60 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.91■□□□□ 0.46
PTCD2Q8WV60 SIRPAP1-201ENST00000448467 1770 ntBASIC17.91■□□□□ 0.46
PTCD2Q8WV60 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCD2Q8WV60 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCD2Q8WV60 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCD2Q8WV60 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCD2Q8WV60 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTCD2Q8WV60 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms