Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 HLA-J-201ENST00000462773 1622 ntBASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 AC100803.2-201ENST00000562459 1963 ntBASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 AC080080.1-201ENST00000625121 2420 ntBASIC18.48■□□□□ 0.55
CCHCR1Q8TD31 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 AC022616.7-201ENST00000525383 220 ntBASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 AL590326.2-201ENST00000625139 305 ntBASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 AL391005.1-201ENST00000623953 2435 ntBASIC18.47■□□□□ 0.55
CCHCR1Q8TD31 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 RASA4DP-201ENST00000460726 1199 ntBASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 LINC01451-201ENST00000623792 534 ntBASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 LINC00602-201ENST00000629776 2065 ntBASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
CCHCR1Q8TD31 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.46■□□□□ 0.54
CCHCR1Q8TD31 LINC00304-203ENST00000565008 1864 ntBASIC18.46■□□□□ 0.54
CCHCR1Q8TD31 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 FAM8A6P-201ENST00000407496 1135 ntBASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 AL359075.1-203ENST00000462729 1002 ntBASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCHCR1Q8TD31 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms