Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CNIH3Q8TBE1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNIH3Q8TBE1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
CNIH3Q8TBE1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.21■□□□□ 0.18
CNIH3Q8TBE1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CNIH3Q8TBE1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNIH3Q8TBE1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CNIH3Q8TBE1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 AC110285.5-201ENST00000611501 352 ntBASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CNIH3Q8TBE1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 PCDHB17P-201ENST00000539533 2393 ntBASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 AP000692.2-201ENST00000608391 879 ntBASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 AC022898.2-201ENST00000616822 1312 ntBASIC16.19■□□□□ 0.18
CNIH3Q8TBE1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CNIH3Q8TBE1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms