Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 MTCL1P1-201ENST00000446207 792 ntBASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 PRELID1P1-202ENST00000567272 903 ntBASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 AC012313.10-201ENST00000623509 926 ntBASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SMARCC2Q8TAQ2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 VENTXP7-201ENST00000475503 772 ntBASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 AC011840.4-201ENST00000578471 627 ntBASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 AC233702.3-201ENST00000578656 1387 ntBASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.71■□□□□ 0.91
SMARCC2Q8TAQ2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SMARCC2Q8TAQ2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 DUSP5P1-201ENST00000441325 1139 ntBASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 AC104819.1-201ENST00000504587 486 ntBASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 AC074051.2-201ENST00000565115 352 ntBASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 Z69720.1-201ENST00000601483 472 ntBASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.7■□□□□ 0.9
SMARCC2Q8TAQ2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 AC005104.2-201ENST00000427818 678 ntBASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 AC012615.1-201ENST00000565797 1299 ntBASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SMARCC2Q8TAQ2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms