Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 DNAJB3-201ENST00000446806 729 ntBASIC21.7■■□□□ 1.06
RTL9Q8NET4 AC108073.2-201ENST00000464002 357 ntBASIC21.7■■□□□ 1.06
RTL9Q8NET4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 GPR89P-201ENST00000407924 1495 ntBASIC21.7■■□□□ 1.06
RTL9Q8NET4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RTL9Q8NET4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.7■■□□□ 1.06
RTL9Q8NET4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 AC023274.1-201ENST00000418278 595 ntBASIC21.69■■□□□ 1.06
RTL9Q8NET4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.69■■□□□ 1.06
RTL9Q8NET4 RPS15P9-201ENST00000494093 319 ntBASIC21.69■■□□□ 1.06
RTL9Q8NET4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 AL353135.1-201ENST00000606729 504 ntBASIC21.69■■□□□ 1.06
RTL9Q8NET4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RTL9Q8NET4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.69■■□□□ 1.06
RTL9Q8NET4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL9Q8NET4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL9Q8NET4 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.68■■□□□ 1.06
RTL9Q8NET4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTL9Q8NET4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL9Q8NET4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTL9Q8NET4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL9Q8NET4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RTL9Q8NET4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RTL9Q8NET4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RTL9Q8NET4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RTL9Q8NET4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RTL9Q8NET4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RTL9Q8NET4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RTL9Q8NET4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms