Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
USP38Q8NB14 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.75■□□□□ 0.75
USP38Q8NB14 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.75■□□□□ 0.75
USP38Q8NB14 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.75■□□□□ 0.75
USP38Q8NB14 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
USP38Q8NB14 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.75■□□□□ 0.75
USP38Q8NB14 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.75■□□□□ 0.75
USP38Q8NB14 FAM8A3P-201ENST00000427218 844 ntBASIC19.75■□□□□ 0.75
USP38Q8NB14 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.75■□□□□ 0.75
USP38Q8NB14 METTL21AP1-201ENST00000438852 635 ntBASIC19.75■□□□□ 0.75
USP38Q8NB14 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.75■□□□□ 0.75
USP38Q8NB14 FGFR3P6-201ENST00000457012 610 ntBASIC19.75■□□□□ 0.75
USP38Q8NB14 HLA-J-202ENST00000469281 1241 ntBASIC19.75■□□□□ 0.75
USP38Q8NB14 HLA-J-203ENST00000494367 1087 ntBASIC19.75■□□□□ 0.75
USP38Q8NB14 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.75■□□□□ 0.75
USP38Q8NB14 RFPL4AP1-201ENST00000530883 850 ntBASIC19.75■□□□□ 0.75
USP38Q8NB14 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.75■□□□□ 0.75
USP38Q8NB14 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.75■□□□□ 0.75
USP38Q8NB14 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.75■□□□□ 0.75
USP38Q8NB14 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.75■□□□□ 0.75
USP38Q8NB14 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
USP38Q8NB14 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.74■□□□□ 0.75
USP38Q8NB14 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
USP38Q8NB14 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.74■□□□□ 0.75
USP38Q8NB14 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
USP38Q8NB14 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
USP38Q8NB14 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
USP38Q8NB14 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.74■□□□□ 0.75
USP38Q8NB14 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP38Q8NB14 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
USP38Q8NB14 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP38Q8NB14 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.74■□□□□ 0.75
USP38Q8NB14 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.74■□□□□ 0.75
USP38Q8NB14 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
USP38Q8NB14 RPS2P28-201ENST00000314255 741 ntBASIC19.74■□□□□ 0.75
USP38Q8NB14 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.74■□□□□ 0.75
USP38Q8NB14 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.74■□□□□ 0.75
USP38Q8NB14 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.74■□□□□ 0.75
USP38Q8NB14 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.74■□□□□ 0.75
USP38Q8NB14 AC034105.1-201ENST00000563488 319 ntBASIC19.74■□□□□ 0.75
USP38Q8NB14 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.74■□□□□ 0.75
USP38Q8NB14 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.74■□□□□ 0.75
USP38Q8NB14 MTDHP3-201ENST00000594186 672 ntBASIC19.74■□□□□ 0.75
USP38Q8NB14 AC092364.2-202ENST00000597012 1073 ntBASIC19.74■□□□□ 0.75
USP38Q8NB14 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP38Q8NB14 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP38Q8NB14 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP38Q8NB14 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
USP38Q8NB14 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.74■□□□□ 0.75
USP38Q8NB14 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.73■□□□□ 0.75
USP38Q8NB14 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP38Q8NB14 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
USP38Q8NB14 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.73■□□□□ 0.75
USP38Q8NB14 AL499627.1-201ENST00000569373 2188 ntBASIC19.73■□□□□ 0.75
USP38Q8NB14 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
USP38Q8NB14 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
USP38Q8NB14 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
USP38Q8NB14 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.73■□□□□ 0.75
USP38Q8NB14 DNAJB3-201ENST00000446806 729 ntBASIC19.73■□□□□ 0.75
USP38Q8NB14 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.73■□□□□ 0.75
USP38Q8NB14 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.73■□□□□ 0.75
USP38Q8NB14 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.73■□□□□ 0.75
USP38Q8NB14 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.73■□□□□ 0.75
USP38Q8NB14 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.73■□□□□ 0.75
USP38Q8NB14 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
USP38Q8NB14 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
USP38Q8NB14 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
USP38Q8NB14 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.73■□□□□ 0.75
USP38Q8NB14 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
USP38Q8NB14 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP38Q8NB14 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP38Q8NB14 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.72■□□□□ 0.75
USP38Q8NB14 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP38Q8NB14 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
USP38Q8NB14 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP38Q8NB14 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP38Q8NB14 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP38Q8NB14 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
USP38Q8NB14 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
USP38Q8NB14 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms