Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.61■□□□□ 0.41
NUDCD3Q8IVD9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 KRT18P29-201ENST00000397031 1267 ntBASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 RPS2P55-201ENST00000397318 883 ntBASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 CCR12P-201ENST00000446203 998 ntBASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 AC107956.1-201ENST00000494359 873 ntBASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 AC113410.3-201ENST00000623366 203 ntBASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NUDCD3Q8IVD9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 CD99P1-205ENST00000527459 561 ntBASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 AC018695.7-201ENST00000624587 2492 ntBASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.59■□□□□ 0.41
NUDCD3Q8IVD9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
NUDCD3Q8IVD9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NUDCD3Q8IVD9 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NUDCD3Q8IVD9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NUDCD3Q8IVD9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NUDCD3Q8IVD9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NUDCD3Q8IVD9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.58■□□□□ 0.4
NUDCD3Q8IVD9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms