Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
MRPL55Q7Z7F7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TSPY15P-201ENST00000457163 923 ntBASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 AC116407.2-201ENST00000613639 860 ntBASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
MRPL55Q7Z7F7 AL391005.1-201ENST00000623953 2435 ntBASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms