Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 AC233702.3-201ENST00000578656 1387 ntBASIC16.62■□□□□ 0.25
RTL4Q6ZR62 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTL4Q6ZR62 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 PRORSD1P-202ENST00000563365 2154 ntBASIC16.61■□□□□ 0.25
RTL4Q6ZR62 GNAS-203ENST00000306120 1878 ntBASIC16.61■□□□□ 0.25
RTL4Q6ZR62 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 NUS1P1-201ENST00000446295 882 ntBASIC16.61■□□□□ 0.25
RTL4Q6ZR62 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTL4Q6ZR62 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 AL450487.1-201ENST00000426799 995 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 AC246785.2-201ENST00000432512 513 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 AC074051.2-201ENST00000565115 352 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 AC009154.2-201ENST00000621177 724 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 AC012313.10-201ENST00000623509 926 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 LINC00602-201ENST00000629776 2065 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 AC099398.1-201ENST00000567919 2776 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RTL4Q6ZR62 AC134043.2-201ENST00000624206 2238 ntBASIC16.6■□□□□ 0.25
RTL4Q6ZR62 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.59■□□□□ 0.25
RTL4Q6ZR62 AL096828.2-201ENST00000567259 1965 ntBASIC16.59■□□□□ 0.25
RTL4Q6ZR62 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms