Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 NAPSB-206ENST00000562112 1266 ntBASIC15.48■□□□□ 0.07
C11orf88Q6PI97 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 AC010331.1-201ENST00000611423 582 ntBASIC15.48■□□□□ 0.07
C11orf88Q6PI97 AC005363.2-201ENST00000618631 242 ntBASIC15.48■□□□□ 0.07
C11orf88Q6PI97 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.48■□□□□ 0.07
C11orf88Q6PI97 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 RCC2P6-201ENST00000526625 1557 ntBASIC15.47■□□□□ 0.07
C11orf88Q6PI97 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 FITM1-202ENST00000559294 800 ntBASIC15.47■□□□□ 0.07
C11orf88Q6PI97 AL160286.2-201ENST00000567150 934 ntBASIC15.47■□□□□ 0.07
C11orf88Q6PI97 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
C11orf88Q6PI97 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 KRT18P22-201ENST00000402024 1347 ntBASIC15.46■□□□□ 0.07
C11orf88Q6PI97 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 TSPY23P-201ENST00000440136 739 ntBASIC15.46■□□□□ 0.07
C11orf88Q6PI97 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 TSPY15P-201ENST00000457163 923 ntBASIC15.46■□□□□ 0.07
C11orf88Q6PI97 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 AC131212.4-201ENST00000623606 975 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms