Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.67■□□□□ 0.74
COL13A1Q5TAT6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 SDHAP2-201ENST00000455183 2001 ntBASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AC104457.1-201ENST00000401024 814 ntBASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 KLF4P1-201ENST00000412782 1185 ntBASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 RPS2P36-201ENST00000456516 831 ntBASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AC093525.8-201ENST00000624099 1342 ntBASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 AF106564.1-201ENST00000607058 2553 ntBASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL13A1Q5TAT6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 Z82202.1-201ENST00000623446 1880 ntBASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 PFN1P12-201ENST00000455938 534 ntBASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 MIR7845-201ENST00000618396 99 ntBASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL13A1Q5TAT6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.64■□□□□ 0.74
COL13A1Q5TAT6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 AC007551.1-201ENST00000457394 519 ntBASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 KRT8P19-201ENST00000551916 1455 ntBASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL13A1Q5TAT6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 AL355334.1-201ENST00000417713 215 ntBASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.63■□□□□ 0.73
COL13A1Q5TAT6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms