Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 AC112698.1-201ENST00000510299 916 ntBASIC9.55□□□□□ -0.88
UBR4Q5T4S7 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 RN7SL555P-201ENST00000584742 339 ntBASIC9.55□□□□□ -0.88
UBR4Q5T4S7 AC018665.1-201ENST00000622927 1362 ntBASIC9.55□□□□□ -0.88
UBR4Q5T4S7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 SLC25A6P2-201ENST00000497974 877 ntBASIC9.55□□□□□ -0.88
UBR4Q5T4S7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 GUSBP5-202ENST00000510805 1989 ntBASIC9.55□□□□□ -0.88
UBR4Q5T4S7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
UBR4Q5T4S7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 Z98044.1-201ENST00000632503 1764 ntBASIC9.54□□□□□ -0.88
UBR4Q5T4S7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 AL163051.1-201ENST00000569214 1512 ntBASIC9.54□□□□□ -0.88
UBR4Q5T4S7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 SDHAP2-201ENST00000455183 2001 ntBASIC9.54□□□□□ -0.88
UBR4Q5T4S7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 MYCLP2-201ENST00000449268 967 ntBASIC9.54□□□□□ -0.88
UBR4Q5T4S7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
UBR4Q5T4S7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 AC073592.8-201ENST00000624126 511 ntBASIC9.53□□□□□ -0.88
UBR4Q5T4S7 KRT8P32-201ENST00000512863 1461 ntBASIC9.53□□□□□ -0.88
UBR4Q5T4S7 WASH6P-202ENST00000359512 1437 ntBASIC9.53□□□□□ -0.88
UBR4Q5T4S7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
UBR4Q5T4S7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms