Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MIR6752-201ENST00000618442 71 ntBASIC28.66■■■□□ 2.18
SNAPC4Q5SXM2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 AL671277.1-201ENST00000429656 993 ntBASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 SERBP1P5-201ENST00000510079 1181 ntBASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 IGHV3-42-201ENST00000520410 361 ntBASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SNAPC4Q5SXM2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SNAPC4Q5SXM2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SNAPC4Q5SXM2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SNAPC4Q5SXM2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SNAPC4Q5SXM2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SNAPC4Q5SXM2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC28.64■■■□□ 2.17
SNAPC4Q5SXM2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
SNAPC4Q5SXM2 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC28.64■■■□□ 2.17
SNAPC4Q5SXM2 CR383656.12-201ENST00000549567 513 ntBASIC28.64■■■□□ 2.17
SNAPC4Q5SXM2 AL359881.2-201ENST00000602973 570 ntBASIC28.64■■■□□ 2.17
SNAPC4Q5SXM2 SRP9-204ENST00000619790 377 ntTSL 2 BASIC28.64■■■□□ 2.17
SNAPC4Q5SXM2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 AC092580.3-201ENST00000430932 139 ntBASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 AC087163.2-201ENST00000457299 853 ntBASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 AC008677.1-201ENST00000519230 1561 ntBASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
SNAPC4Q5SXM2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 MRPS18AP1-201ENST00000414458 589 ntBASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 RBPMS2P1-201ENST00000437762 623 ntBASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 RN7SL692P-201ENST00000464677 288 ntBASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
SNAPC4Q5SXM2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 SPCS2P4-201ENST00000436160 681 ntBASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 RARRES2P8-201ENST00000566335 367 ntBASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SNAPC4Q5SXM2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 AL596325.1-201ENST00000563991 1082 ntBASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC28.6■■■□□ 2.17
SNAPC4Q5SXM2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 PPP6R2P1-201ENST00000450880 1275 ntBASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 AC026150.2-201ENST00000564693 1156 ntBASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC28.59■■■□□ 2.17
SNAPC4Q5SXM2 AC107918.2-201ENST00000530817 355 ntBASIC28.59■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms