Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 AC073621.1-201ENST00000392730 636 ntBASIC18.69■□□□□ 0.58
VARS2Q5ST30 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 AC140113.2-201ENST00000604370 208 ntBASIC18.69■□□□□ 0.58
VARS2Q5ST30 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 MIR1199-201ENST00000621445 119 ntBASIC18.69■□□□□ 0.58
VARS2Q5ST30 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
VARS2Q5ST30 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
VARS2Q5ST30 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARS2Q5ST30 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VARS2Q5ST30 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARS2Q5ST30 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 MED15P5-201ENST00000423150 992 ntBASIC18.68■□□□□ 0.58
VARS2Q5ST30 AC005104.2-201ENST00000427818 678 ntBASIC18.68■□□□□ 0.58
VARS2Q5ST30 SIGLEC30P-201ENST00000455569 941 ntBASIC18.68■□□□□ 0.58
VARS2Q5ST30 IGHV3-52-201ENST00000519770 353 ntBASIC18.68■□□□□ 0.58
VARS2Q5ST30 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 STK25P1-201ENST00000585406 838 ntBASIC18.68■□□□□ 0.58
VARS2Q5ST30 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARS2Q5ST30 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VARS2Q5ST30 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VARS2Q5ST30 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.68■□□□□ 0.58
VARS2Q5ST30 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 AC009947.1-201ENST00000444350 727 ntBASIC18.67■□□□□ 0.58
VARS2Q5ST30 AC136632.2-201ENST00000512891 861 ntBASIC18.67■□□□□ 0.58
VARS2Q5ST30 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 AL355385.1-201ENST00000606123 409 ntBASIC18.67■□□□□ 0.58
VARS2Q5ST30 FAM197Y3-203ENST00000618346 717 ntBASIC18.67■□□□□ 0.58
VARS2Q5ST30 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
VARS2Q5ST30 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.67■□□□□ 0.58
VARS2Q5ST30 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.66■□□□□ 0.58
VARS2Q5ST30 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms