Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RUNDC3AQ59EK9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 SNORA78-201ENST00000459373 127 ntBASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 TMEM191A-211ENST00000637163 1067 ntBASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 LYSMD4-203ENST00000378904 2122 ntBASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RUNDC3AQ59EK9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 PKD1P1-201ENST00000458669 6805 ntBASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 AP000523.1-201ENST00000398242 1049 ntBASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 AC005104.2-201ENST00000427818 678 ntBASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 TSPY15P-201ENST00000457163 923 ntBASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RUNDC3AQ59EK9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 AC106886.4-201ENST00000623557 2502 ntBASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 TNRC18P3-201ENST00000441896 2691 ntBASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 ECEL1P3-201ENST00000427961 737 ntBASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RUNDC3AQ59EK9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms