Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 AC012618.2-201ENST00000428058 849 ntBASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 KRT18P23-201ENST00000435622 1283 ntBASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 MIR6786-201ENST00000616843 113 ntBASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 LINC02199-201ENST00000506655 2702 ntBASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ANKRD55Q3KP44 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 AC093827.2-201ENST00000512654 315 ntBASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 MIR4674-201ENST00000582457 87 ntBASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 AP000692.2-201ENST00000608391 879 ntBASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 AL603756.1-201ENST00000606511 2163 ntBASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ANKRD55Q3KP44 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ANKRD55Q3KP44 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ANKRD55Q3KP44 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
ANKRD55Q3KP44 CROCCP1-201ENST00000426910 5675 ntBASIC14.71□□□□□ -0.06
ANKRD55Q3KP44 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ANKRD55Q3KP44 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ANKRD55Q3KP44 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.06
ANKRD55Q3KP44 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ANKRD55Q3KP44 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ANKRD55Q3KP44 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms