Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CFHR3Q02985 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CFHR3Q02985 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CFHR3Q02985 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CFHR3Q02985 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CFHR3Q02985 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CFHR3Q02985 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.84□□□□□ -0.19
CFHR3Q02985 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CFHR3Q02985 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CFHR3Q02985 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CFHR3Q02985 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.83□□□□□ -0.19
CFHR3Q02985 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CFHR3Q02985 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CFHR3Q02985 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CFHR3Q02985 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 AC103564.2-201ENST00000432853 1299 ntBASIC13.83□□□□□ -0.2
CFHR3Q02985 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.83□□□□□ -0.2
CFHR3Q02985 AF238378.1-201ENST00000526806 358 ntBASIC13.83□□□□□ -0.2
CFHR3Q02985 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
CFHR3Q02985 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.83□□□□□ -0.2
CFHR3Q02985 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.83□□□□□ -0.2
CFHR3Q02985 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.83□□□□□ -0.2
CFHR3Q02985 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CFHR3Q02985 AP000867.4-201ENST00000641616 219 ntBASIC13.83□□□□□ -0.2
CFHR3Q02985 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CFHR3Q02985 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 NOC2LP1-202ENST00000452600 2235 ntBASIC13.83□□□□□ -0.2
CFHR3Q02985 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.83□□□□□ -0.2
CFHR3Q02985 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CFHR3Q02985 OR6D1P-202ENST00000641007 5290 ntBASIC13.83□□□□□ -0.2
CFHR3Q02985 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.82□□□□□ -0.2
CFHR3Q02985 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.82□□□□□ -0.2
CFHR3Q02985 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.82□□□□□ -0.2
CFHR3Q02985 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.82□□□□□ -0.2
CFHR3Q02985 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CFHR3Q02985 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.82□□□□□ -0.2
CFHR3Q02985 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.82□□□□□ -0.2
CFHR3Q02985 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 AC104692.2-201ENST00000603054 253 ntBASIC13.82□□□□□ -0.2
CFHR3Q02985 AL121912.1-201ENST00000603683 238 ntBASIC13.82□□□□□ -0.2
CFHR3Q02985 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.82□□□□□ -0.2
CFHR3Q02985 AC019129.2-201ENST00000609837 1235 ntBASIC13.82□□□□□ -0.2
CFHR3Q02985 AL355877.3-201ENST00000622820 899 ntBASIC13.82□□□□□ -0.2
CFHR3Q02985 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CFHR3Q02985 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CFHR3Q02985 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CFHR3Q02985 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CFHR3Q02985 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
CFHR3Q02985 AP005117.1-201ENST00000584346 1413 ntBASIC13.81□□□□□ -0.2
CFHR3Q02985 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CFHR3Q02985 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CFHR3Q02985 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.81□□□□□ -0.2
CFHR3Q02985 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.81□□□□□ -0.2
CFHR3Q02985 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.81□□□□□ -0.2
CFHR3Q02985 AL353593.2-201ENST00000602529 1483 ntBASIC13.81□□□□□ -0.2
CFHR3Q02985 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms