Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PEX3P56589 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PEX3P56589 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PEX3P56589 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.5■□□□□ 0.71
PEX3P56589 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PEX3P56589 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.5■□□□□ 0.71
PEX3P56589 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.5■□□□□ 0.71
PEX3P56589 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.5■□□□□ 0.71
PEX3P56589 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.5■□□□□ 0.71
PEX3P56589 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.5■□□□□ 0.71
PEX3P56589 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.5■□□□□ 0.71
PEX3P56589 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.5■□□□□ 0.71
PEX3P56589 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.5■□□□□ 0.71
PEX3P56589 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.5■□□□□ 0.71
PEX3P56589 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.5■□□□□ 0.71
PEX3P56589 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PEX3P56589 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
PEX3P56589 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.5■□□□□ 0.71
PEX3P56589 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PEX3P56589 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.5■□□□□ 0.71
PEX3P56589 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PEX3P56589 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PEX3P56589 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.49■□□□□ 0.71
PEX3P56589 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PEX3P56589 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PEX3P56589 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PEX3P56589 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.49■□□□□ 0.71
PEX3P56589 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.49■□□□□ 0.71
PEX3P56589 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.49■□□□□ 0.71
PEX3P56589 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.49■□□□□ 0.71
PEX3P56589 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.49■□□□□ 0.71
PEX3P56589 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.49■□□□□ 0.71
PEX3P56589 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.49■□□□□ 0.71
PEX3P56589 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PEX3P56589 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PEX3P56589 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.49■□□□□ 0.71
PEX3P56589 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PEX3P56589 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.49■□□□□ 0.71
PEX3P56589 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PEX3P56589 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.49■□□□□ 0.71
PEX3P56589 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PEX3P56589 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 AC067852.2-201ENST00000590513 2313 ntBASIC19.48■□□□□ 0.71
PEX3P56589 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.48■□□□□ 0.71
PEX3P56589 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
PEX3P56589 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PEX3P56589 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PEX3P56589 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PEX3P56589 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 AKR1C7P-201ENST00000305623 895 ntBASIC19.48■□□□□ 0.71
PEX3P56589 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PEX3P56589 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PEX3P56589 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.48■□□□□ 0.71
PEX3P56589 EMBP1-201ENST00000458200 901 ntBASIC19.48■□□□□ 0.71
PEX3P56589 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.48■□□□□ 0.71
PEX3P56589 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.48■□□□□ 0.71
PEX3P56589 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.48■□□□□ 0.71
PEX3P56589 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.48■□□□□ 0.71
PEX3P56589 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 RN7SL510P-201ENST00000581311 263 ntBASIC19.48■□□□□ 0.71
PEX3P56589 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
PEX3P56589 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PEX3P56589 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PEX3P56589 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.48■□□□□ 0.71
PEX3P56589 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.47■□□□□ 0.71
PEX3P56589 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.47■□□□□ 0.71
PEX3P56589 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.47■□□□□ 0.71
PEX3P56589 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PEX3P56589 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms