Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKN2DP55273 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKN2DP55273 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKN2DP55273 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.48■□□□□ 0.39
CDKN2DP55273 AL136038.3-201ENST00000561909 1096 ntBASIC17.48■□□□□ 0.39
CDKN2DP55273 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.48■□□□□ 0.39
CDKN2DP55273 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.48■□□□□ 0.39
CDKN2DP55273 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.48■□□□□ 0.39
CDKN2DP55273 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDKN2DP55273 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDKN2DP55273 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDKN2DP55273 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.48■□□□□ 0.39
CDKN2DP55273 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CDKN2DP55273 PCDHA12-202ENST00000613593 2588 ntBASIC17.47■□□□□ 0.39
CDKN2DP55273 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKN2DP55273 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDKN2DP55273 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDKN2DP55273 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKN2DP55273 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.47■□□□□ 0.39
CDKN2DP55273 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKN2DP55273 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKN2DP55273 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.47■□□□□ 0.39
CDKN2DP55273 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKN2DP55273 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDKN2DP55273 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.47■□□□□ 0.39
CDKN2DP55273 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKN2DP55273 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDKN2DP55273 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CDKN2DP55273 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
CDKN2DP55273 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDKN2DP55273 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.47■□□□□ 0.39
CDKN2DP55273 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.47■□□□□ 0.39
CDKN2DP55273 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDKN2DP55273 AC097374.2-201ENST00000618617 1306 ntBASIC17.47■□□□□ 0.39
CDKN2DP55273 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CDKN2DP55273 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKN2DP55273 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.46■□□□□ 0.39
CDKN2DP55273 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.46■□□□□ 0.39
CDKN2DP55273 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 GUSBP12-201ENST00000513727 720 ntBASIC17.46■□□□□ 0.39
CDKN2DP55273 AL592071.1-201ENST00000611956 408 ntBASIC17.46■□□□□ 0.39
CDKN2DP55273 AC124864.1-201ENST00000623408 392 ntBASIC17.46■□□□□ 0.39
CDKN2DP55273 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKN2DP55273 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CDKN2DP55273 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDKN2DP55273 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.46■□□□□ 0.39
CDKN2DP55273 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CDKN2DP55273 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CDKN2DP55273 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.45■□□□□ 0.38
CDKN2DP55273 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CDKN2DP55273 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDKN2DP55273 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms