Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PMS1P54277 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PMS1P54277 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PMS1P54277 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.45■□□□□ 0.7
PMS1P54277 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PMS1P54277 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.45■□□□□ 0.7
PMS1P54277 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PMS1P54277 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.45■□□□□ 0.7
PMS1P54277 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.45■□□□□ 0.7
PMS1P54277 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.45■□□□□ 0.7
PMS1P54277 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PMS1P54277 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.45■□□□□ 0.7
PMS1P54277 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.45■□□□□ 0.7
PMS1P54277 AD000864.1-201ENST00000624076 2295 ntBASIC19.45■□□□□ 0.7
PMS1P54277 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.45■□□□□ 0.7
PMS1P54277 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PMS1P54277 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.44■□□□□ 0.7
PMS1P54277 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
PMS1P54277 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PMS1P54277 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.44■□□□□ 0.7
PMS1P54277 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PMS1P54277 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 TSPY22P-201ENST00000427496 604 ntBASIC19.44■□□□□ 0.7
PMS1P54277 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.44■□□□□ 0.7
PMS1P54277 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
PMS1P54277 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PMS1P54277 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.44■□□□□ 0.7
PMS1P54277 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PMS1P54277 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PMS1P54277 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.43■□□□□ 0.7
PMS1P54277 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.43■□□□□ 0.7
PMS1P54277 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PMS1P54277 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PMS1P54277 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PMS1P54277 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PMS1P54277 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
PMS1P54277 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.43■□□□□ 0.7
PMS1P54277 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.43■□□□□ 0.7
PMS1P54277 KRT18P21-201ENST00000515767 1272 ntBASIC19.43■□□□□ 0.7
PMS1P54277 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.43■□□□□ 0.7
PMS1P54277 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.43■□□□□ 0.7
PMS1P54277 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.43■□□□□ 0.7
PMS1P54277 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.43■□□□□ 0.7
PMS1P54277 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PMS1P54277 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.43■□□□□ 0.7
PMS1P54277 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.43■□□□□ 0.7
PMS1P54277 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PMS1P54277 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.43■□□□□ 0.7
PMS1P54277 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PMS1P54277 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PMS1P54277 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms