Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF140P52738 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF140P52738 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF140P52738 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.61■□□□□ 0.41
ZNF140P52738 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ZNF140P52738 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ZNF140P52738 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.6■□□□□ 0.41
ZNF140P52738 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF140P52738 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
ZNF140P52738 AC139713.2-201ENST00000641328 2723 ntBASIC17.6■□□□□ 0.41
ZNF140P52738 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF140P52738 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF140P52738 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF140P52738 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ZNF140P52738 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ZNF140P52738 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.6■□□□□ 0.41
ZNF140P52738 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 AL049757.1-201ENST00000616842 1596 ntBASIC17.6■□□□□ 0.41
ZNF140P52738 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ZNF140P52738 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.6■□□□□ 0.41
ZNF140P52738 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 LYSMD4-203ENST00000378904 2122 ntBASIC17.6■□□□□ 0.41
ZNF140P52738 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ZNF140P52738 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF140P52738 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF140P52738 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF140P52738 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ZNF140P52738 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZNF140P52738 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ZNF140P52738 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 AC141586.5-201ENST00000624546 2050 ntBASIC17.59■□□□□ 0.41
ZNF140P52738 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF140P52738 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF140P52738 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ZNF140P52738 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 AC109462.3-201ENST00000573934 613 ntBASIC17.59■□□□□ 0.41
ZNF140P52738 AL139327.4-201ENST00000612362 153 ntBASIC17.59■□□□□ 0.41
ZNF140P52738 AC114341.1-201ENST00000618070 349 ntBASIC17.59■□□□□ 0.41
ZNF140P52738 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF140P52738 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ZNF140P52738 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ZNF140P52738 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF140P52738 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF140P52738 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF140P52738 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF140P52738 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF140P52738 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF140P52738 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF140P52738 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF140P52738 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF140P52738 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
ZNF140P52738 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF140P52738 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF140P52738 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ZNF140P52738 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF140P52738 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF140P52738 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
ZNF140P52738 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.58■□□□□ 0.4
ZNF140P52738 AC103564.2-201ENST00000432853 1299 ntBASIC17.58■□□□□ 0.4
ZNF140P52738 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF140P52738 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.58■□□□□ 0.4
ZNF140P52738 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 AL645608.8-201ENST00000606034 2086 ntBASIC17.58■□□□□ 0.4
ZNF140P52738 INTS4P1-201ENST00000438455 1935 ntBASIC17.58■□□□□ 0.4
ZNF140P52738 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.58■□□□□ 0.4
ZNF140P52738 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF140P52738 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF140P52738 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
ZNF140P52738 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF140P52738 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF140P52738 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF140P52738 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms