Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AC107918.2-201ENST00000530817 355 ntBASIC31.13■■■□□ 2.57
SMARCA2P51531 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMARCA2P51531 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC31.12■■■□□ 2.57
SMARCA2P51531 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
SMARCA2P51531 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCA2P51531 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCA2P51531 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
SMARCA2P51531 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC31.12■■■□□ 2.57
SMARCA2P51531 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC31.12■■■□□ 2.57
SMARCA2P51531 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC31.12■■■□□ 2.57
SMARCA2P51531 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SMARCA2P51531 AC126763.1-201ENST00000552015 2118 ntBASIC31.11■■■□□ 2.57
SMARCA2P51531 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA2P51531 MYCLP1-201ENST00000372451 1075 ntBASIC31.11■■■□□ 2.57
SMARCA2P51531 AC005237.2-201ENST00000434368 219 ntBASIC31.11■■■□□ 2.57
SMARCA2P51531 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
SMARCA2P51531 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
SMARCA2P51531 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC31.11■■■□□ 2.57
SMARCA2P51531 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC31.11■■■□□ 2.57
SMARCA2P51531 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA2P51531 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SMARCA2P51531 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC31.1■■■□□ 2.57
SMARCA2P51531 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA2P51531 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC31.1■■■□□ 2.57
SMARCA2P51531 SPDYE14P-201ENST00000442619 822 ntBASIC31.1■■■□□ 2.57
SMARCA2P51531 AL592309.1-201ENST00000443127 649 ntBASIC31.1■■■□□ 2.57
SMARCA2P51531 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA2P51531 AC243562.1-201ENST00000560672 389 ntBASIC31.1■■■□□ 2.57
SMARCA2P51531 RARRES2P8-201ENST00000566335 367 ntBASIC31.1■■■□□ 2.57
SMARCA2P51531 LINC02560-201ENST00000596379 459 ntBASIC31.1■■■□□ 2.57
SMARCA2P51531 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA2P51531 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC31.1■■■□□ 2.57
SMARCA2P51531 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC31.1■■■□□ 2.57
SMARCA2P51531 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC31.1■■■□□ 2.57
SMARCA2P51531 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA2P51531 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA2P51531 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA2P51531 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
SMARCA2P51531 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SMARCA2P51531 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA2P51531 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA2P51531 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA2P51531 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC31.09■■■□□ 2.57
SMARCA2P51531 AP005018.1-201ENST00000525475 301 ntBASIC31.09■■■□□ 2.57
SMARCA2P51531 AL390754.1-201ENST00000619088 582 ntBASIC31.09■■■□□ 2.57
SMARCA2P51531 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
SMARCA2P51531 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
SMARCA2P51531 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
SMARCA2P51531 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCA2P51531 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA2P51531 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC31.09■■■□□ 2.57
SMARCA2P51531 AKAP8P1-201ENST00000434743 1349 ntBASIC31.09■■■□□ 2.57
SMARCA2P51531 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA2P51531 RAC2-204ENST00000406508 893 ntTSL 5 BASIC31.09■■■□□ 2.57
SMARCA2P51531 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
SMARCA2P51531 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC31.09■■■□□ 2.57
SMARCA2P51531 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
SMARCA2P51531 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC31.09■■■□□ 2.57
SMARCA2P51531 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC31.08■■■□□ 2.57
SMARCA2P51531 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 FO538757.1-201ENST00000623083 1397 ntBASIC31.08■■■□□ 2.57
SMARCA2P51531 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC31.08■■■□□ 2.57
SMARCA2P51531 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC31.08■■■□□ 2.57
SMARCA2P51531 TREML5P-201ENST00000421694 576 ntBASIC31.08■■■□□ 2.57
SMARCA2P51531 SLC25A39P2-201ENST00000537614 270 ntBASIC31.08■■■□□ 2.57
SMARCA2P51531 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC31.08■■■□□ 2.57
SMARCA2P51531 COX11-202ENST00000571584 1108 ntTSL 2 BASIC31.08■■■□□ 2.57
SMARCA2P51531 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC31.08■■■□□ 2.57
SMARCA2P51531 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMARCA2P51531 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC31.08■■■□□ 2.57
SMARCA2P51531 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC31.07■■■□□ 2.57
SMARCA2P51531 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC31.07■■■□□ 2.57
SMARCA2P51531 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC31.07■■■□□ 2.56
SMARCA2P51531 EDF1-203ENST00000371649 790 ntTSL 2 BASIC31.07■■■□□ 2.56
SMARCA2P51531 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC31.07■■■□□ 2.56
SMARCA2P51531 DUX4L17-201ENST00000557360 1267 ntBASIC31.07■■■□□ 2.56
SMARCA2P51531 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC31.07■■■□□ 2.56
SMARCA2P51531 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC31.07■■■□□ 2.56
SMARCA2P51531 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMARCA2P51531 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
SMARCA2P51531 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC31.07■■■□□ 2.56
SMARCA2P51531 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC31.07■■■□□ 2.56
SMARCA2P51531 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC31.07■■■□□ 2.56
SMARCA2P51531 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SMARCA2P51531 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
SMARCA2P51531 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA2P51531 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA2P51531 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA2P51531 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
SMARCA2P51531 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
SMARCA2P51531 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC31.06■■■□□ 2.56
SMARCA2P51531 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
SMARCA2P51531 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms