Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF144AP50876 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
RNF144AP50876 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF144AP50876 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF144AP50876 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.48■□□□□ 0.23
RNF144AP50876 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF144AP50876 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RNF144AP50876 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF144AP50876 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF144AP50876 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF144AP50876 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF144AP50876 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF144AP50876 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF144AP50876 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF144AP50876 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF144AP50876 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF144AP50876 LINC01238-205ENST00000567549 1107 ntBASIC16.48■□□□□ 0.23
RNF144AP50876 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF144AP50876 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.48■□□□□ 0.23
RNF144AP50876 AL390719.2-201ENST00000606993 987 ntBASIC16.48■□□□□ 0.23
RNF144AP50876 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.48■□□□□ 0.23
RNF144AP50876 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF144AP50876 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.48■□□□□ 0.23
RNF144AP50876 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RNF144AP50876 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF144AP50876 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF144AP50876 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF144AP50876 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.47■□□□□ 0.23
RNF144AP50876 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 AC113404.2-201ENST00000507884 177 ntBASIC16.47■□□□□ 0.23
RNF144AP50876 DUTP2-201ENST00000519164 463 ntBASIC16.47■□□□□ 0.23
RNF144AP50876 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF144AP50876 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.47■□□□□ 0.23
RNF144AP50876 AC008687.5-201ENST00000593746 558 ntBASIC16.47■□□□□ 0.23
RNF144AP50876 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.47■□□□□ 0.23
RNF144AP50876 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.47■□□□□ 0.23
RNF144AP50876 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF144AP50876 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RNF144AP50876 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RNF144AP50876 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RNF144AP50876 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF144AP50876 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
RNF144AP50876 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.46■□□□□ 0.23
RNF144AP50876 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF144AP50876 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
RNF144AP50876 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
RNF144AP50876 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF144AP50876 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF144AP50876 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF144AP50876 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.46■□□□□ 0.23
RNF144AP50876 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF144AP50876 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.46■□□□□ 0.23
RNF144AP50876 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RNF144AP50876 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms