Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.64■□□□□ 0.57
TUBP50607 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 AC096633.1-201ENST00000422446 749 ntBASIC18.64■□□□□ 0.57
TUBP50607 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBP50607 AC106795.1-205ENST00000512851 1056 ntBASIC18.64■□□□□ 0.57
TUBP50607 AP002469.2-201ENST00000531724 424 ntBASIC18.64■□□□□ 0.57
TUBP50607 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.64■□□□□ 0.57
TUBP50607 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.64■□□□□ 0.57
TUBP50607 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBP50607 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.64■□□□□ 0.57
TUBP50607 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBP50607 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TUBP50607 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
TUBP50607 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.64■□□□□ 0.57
TUBP50607 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TUBP50607 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TUBP50607 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TUBP50607 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TUBP50607 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
TUBP50607 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TUBP50607 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
TUBP50607 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBP50607 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TUBP50607 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TUBP50607 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBP50607 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBP50607 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 RBM17P3-201ENST00000417687 1192 ntBASIC18.63■□□□□ 0.57
TUBP50607 AF238378.1-201ENST00000526806 358 ntBASIC18.63■□□□□ 0.57
TUBP50607 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBP50607 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBP50607 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBP50607 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.63■□□□□ 0.57
TUBP50607 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TUBP50607 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.63■□□□□ 0.57
TUBP50607 PRORSD1P-202ENST00000563365 2154 ntBASIC18.63■□□□□ 0.57
TUBP50607 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.63■□□□□ 0.57
TUBP50607 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
TUBP50607 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TUBP50607 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TUBP50607 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TUBP50607 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TUBP50607 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TUBP50607 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBP50607 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBP50607 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBP50607 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBP50607 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBP50607 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBP50607 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 AC132008.2-207ENST00000454517 770 ntBASIC18.62■□□□□ 0.57
TUBP50607 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBP50607 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.62■□□□□ 0.57
TUBP50607 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.62■□□□□ 0.57
TUBP50607 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.62■□□□□ 0.57
TUBP50607 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.62■□□□□ 0.57
TUBP50607 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBP50607 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBP50607 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.62■□□□□ 0.57
TUBP50607 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.62■□□□□ 0.57
TUBP50607 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TUBP50607 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms