Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CENPFP49454 PHGDH-209ENST00000641074 1780 ntBASIC19.8■□□□□ 0.76
CENPFP49454 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 AC005332.7-201ENST00000614046 2005 ntBASIC19.8■□□□□ 0.76
CENPFP49454 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CENPFP49454 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CENPFP49454 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.8■□□□□ 0.76
CENPFP49454 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.8■□□□□ 0.76
CENPFP49454 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.8■□□□□ 0.76
CENPFP49454 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CENPFP49454 TUBB3P1-201ENST00000405796 1332 ntBASIC19.8■□□□□ 0.76
CENPFP49454 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.8■□□□□ 0.76
CENPFP49454 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CENPFP49454 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.8■□□□□ 0.76
CENPFP49454 LINC02560-201ENST00000596379 459 ntBASIC19.8■□□□□ 0.76
CENPFP49454 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.79■□□□□ 0.76
CENPFP49454 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.79■□□□□ 0.76
CENPFP49454 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 AC104581.1-202ENST00000635932 2618 ntBASIC19.79■□□□□ 0.76
CENPFP49454 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.79■□□□□ 0.76
CENPFP49454 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 AC003669.1-201ENST00000334569 611 ntBASIC19.79■□□□□ 0.76
CENPFP49454 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.79■□□□□ 0.76
CENPFP49454 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.79■□□□□ 0.76
CENPFP49454 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.79■□□□□ 0.76
CENPFP49454 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.79■□□□□ 0.76
CENPFP49454 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.79■□□□□ 0.76
CENPFP49454 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.79■□□□□ 0.76
CENPFP49454 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.79■□□□□ 0.76
CENPFP49454 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.79■□□□□ 0.76
CENPFP49454 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CENPFP49454 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.79■□□□□ 0.76
CENPFP49454 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
CENPFP49454 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CENPFP49454 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CENPFP49454 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.79■□□□□ 0.76
CENPFP49454 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.78■□□□□ 0.76
CENPFP49454 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.78■□□□□ 0.76
CENPFP49454 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.78■□□□□ 0.76
CENPFP49454 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.78■□□□□ 0.76
CENPFP49454 CR383656.12-201ENST00000549567 513 ntBASIC19.78■□□□□ 0.76
CENPFP49454 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.78■□□□□ 0.76
CENPFP49454 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.78■□□□□ 0.76
CENPFP49454 AC097637.2-201ENST00000624096 1997 ntBASIC19.78■□□□□ 0.76
CENPFP49454 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.78■□□□□ 0.76
CENPFP49454 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.78■□□□□ 0.76
CENPFP49454 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CENPFP49454 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CENPFP49454 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.78■□□□□ 0.76
CENPFP49454 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 AL132655.2-201ENST00000596276 594 ntBASIC19.78■□□□□ 0.76
CENPFP49454 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 AL353593.2-201ENST00000602529 1483 ntBASIC19.78■□□□□ 0.76
CENPFP49454 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CENPFP49454 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CENPFP49454 GPS2P2-201ENST00000430745 888 ntBASIC19.78■□□□□ 0.76
CENPFP49454 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CENPFP49454 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.77■□□□□ 0.76
CENPFP49454 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CENPFP49454 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CENPFP49454 AL512356.2-201ENST00000546955 174 ntBASIC19.77■□□□□ 0.76
CENPFP49454 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.77■□□□□ 0.76
CENPFP49454 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CENPFP49454 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CENPFP49454 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CENPFP49454 BASP1P1-201ENST00000430708 665 ntBASIC19.77■□□□□ 0.75
CENPFP49454 CNN2P2-201ENST00000443536 909 ntBASIC19.77■□□□□ 0.75
CENPFP49454 CNN2P3-201ENST00000450201 906 ntBASIC19.77■□□□□ 0.75
CENPFP49454 AL136317.3-201ENST00000618497 906 ntBASIC19.77■□□□□ 0.75
CENPFP49454 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.77■□□□□ 0.75
CENPFP49454 REXO1L3P-201ENST00000622202 1288 ntBASIC19.77■□□□□ 0.75
CENPFP49454 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms