Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 REXO1L11P-201ENST00000620964 1927 ntBASIC16.76■□□□□ 0.27
GABRA4P48169 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GABRA4P48169 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
GABRA4P48169 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.76■□□□□ 0.27
GABRA4P48169 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GABRA4P48169 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
GABRA4P48169 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GABRA4P48169 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.75■□□□□ 0.27
GABRA4P48169 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
GABRA4P48169 AC148477.5-201ENST00000625164 1645 ntBASIC16.75■□□□□ 0.27
GABRA4P48169 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
GABRA4P48169 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 SLC25A6P5-201ENST00000435663 894 ntBASIC16.75■□□□□ 0.27
GABRA4P48169 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.75■□□□□ 0.27
GABRA4P48169 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
GABRA4P48169 AL022326.1-202ENST00000641533 845 ntBASIC16.75■□□□□ 0.27
GABRA4P48169 AC107918.4-202ENST00000641623 219 ntBASIC16.75■□□□□ 0.27
GABRA4P48169 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
GABRA4P48169 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.75■□□□□ 0.27
GABRA4P48169 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
GABRA4P48169 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.74■□□□□ 0.27
GABRA4P48169 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
GABRA4P48169 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
GABRA4P48169 AC006116.8-202ENST00000587620 1550 ntBASIC16.74■□□□□ 0.27
GABRA4P48169 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRA4P48169 AC003669.1-201ENST00000334569 611 ntBASIC16.74■□□□□ 0.27
GABRA4P48169 AL020989.1-201ENST00000422979 469 ntBASIC16.74■□□□□ 0.27
GABRA4P48169 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.74■□□□□ 0.27
GABRA4P48169 OR7E14P-202ENST00000530490 1290 ntBASIC16.74■□□□□ 0.27
GABRA4P48169 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.74■□□□□ 0.27
GABRA4P48169 AC012640.2-201ENST00000561606 901 ntBASIC16.74■□□□□ 0.27
GABRA4P48169 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.74■□□□□ 0.27
GABRA4P48169 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRA4P48169 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
GABRA4P48169 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.74■□□□□ 0.27
GABRA4P48169 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRA4P48169 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.74■□□□□ 0.27
GABRA4P48169 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.74■□□□□ 0.27
GABRA4P48169 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.74■□□□□ 0.27
GABRA4P48169 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
GABRA4P48169 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GABRA4P48169 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 IL9RP2-201ENST00000423948 1312 ntBASIC16.73■□□□□ 0.27
GABRA4P48169 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GABRA4P48169 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.73■□□□□ 0.27
GABRA4P48169 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.73■□□□□ 0.27
GABRA4P48169 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.73■□□□□ 0.27
GABRA4P48169 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GABRA4P48169 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms