Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.79■□□□□ 0.6
BRCC3P46736 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCC3P46736 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.78■□□□□ 0.6
BRCC3P46736 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCC3P46736 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRCC3P46736 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRCC3P46736 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.78■□□□□ 0.6
BRCC3P46736 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
BRCC3P46736 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRCC3P46736 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.78■□□□□ 0.6
BRCC3P46736 UNC93B6-202ENST00000528242 690 ntBASIC18.78■□□□□ 0.6
BRCC3P46736 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.78■□□□□ 0.6
BRCC3P46736 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCC3P46736 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
BRCC3P46736 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRCC3P46736 ABALON-201ENST00000629058 1903 ntBASIC18.78■□□□□ 0.6
BRCC3P46736 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.78■□□□□ 0.6
BRCC3P46736 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BRCC3P46736 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRCC3P46736 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCC3P46736 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCC3P46736 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
BRCC3P46736 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.78■□□□□ 0.6
BRCC3P46736 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
BRCC3P46736 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCC3P46736 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCC3P46736 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 AC003669.1-201ENST00000334569 611 ntBASIC18.77■□□□□ 0.6
BRCC3P46736 AC073621.1-201ENST00000392730 636 ntBASIC18.77■□□□□ 0.6
BRCC3P46736 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 KRT18P27-201ENST00000427733 1299 ntBASIC18.77■□□□□ 0.6
BRCC3P46736 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.77■□□□□ 0.6
BRCC3P46736 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCC3P46736 TERC-201ENST00000602385 541 ntBASIC18.77■□□□□ 0.6
BRCC3P46736 Z83851.2-201ENST00000609564 659 ntBASIC18.77■□□□□ 0.6
BRCC3P46736 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.77■□□□□ 0.6
BRCC3P46736 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCC3P46736 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCC3P46736 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.77■□□□□ 0.6
BRCC3P46736 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.77■□□□□ 0.59
BRCC3P46736 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRCC3P46736 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.76■□□□□ 0.59
BRCC3P46736 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
BRCC3P46736 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.76■□□□□ 0.59
BRCC3P46736 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
BRCC3P46736 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.76■□□□□ 0.59
BRCC3P46736 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.76■□□□□ 0.59
BRCC3P46736 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 STK25P1-201ENST00000585406 838 ntBASIC18.76■□□□□ 0.59
BRCC3P46736 AL356488.2-201ENST00000602755 427 ntBASIC18.76■□□□□ 0.59
BRCC3P46736 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
BRCC3P46736 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.76■□□□□ 0.59
BRCC3P46736 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCC3P46736 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
BRCC3P46736 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCC3P46736 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms