Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC1A3P43003 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC1A3P43003 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A3P43003 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A3P43003 AC084018.2-201ENST00000613093 2607 ntBASIC16.31■□□□□ 0.2
SLC1A3P43003 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SLC1A3P43003 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC1A3P43003 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC1A3P43003 AL023806.1-201ENST00000603994 1649 ntBASIC16.3■□□□□ 0.2
SLC1A3P43003 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC1A3P43003 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC1A3P43003 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC1A3P43003 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC1A3P43003 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SLC1A3P43003 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SLC1A3P43003 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC1A3P43003 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC1A3P43003 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.3■□□□□ 0.2
SLC1A3P43003 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 AL390719.2-201ENST00000606993 987 ntBASIC16.3■□□□□ 0.2
SLC1A3P43003 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SLC1A3P43003 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC1A3P43003 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 Z83836.1-201ENST00000624605 1642 ntBASIC16.3■□□□□ 0.2
SLC1A3P43003 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SLC1A3P43003 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC1A3P43003 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC1A3P43003 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A3P43003 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A3P43003 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 AL645929.1-201ENST00000420084 975 ntBASIC16.29■□□□□ 0.2
SLC1A3P43003 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A3P43003 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 RNF126P1-202ENST00000569893 925 ntBASIC16.29■□□□□ 0.2
SLC1A3P43003 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.29■□□□□ 0.2
SLC1A3P43003 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 AC124067.4-201ENST00000519691 2379 ntBASIC16.29■□□□□ 0.2
SLC1A3P43003 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC1A3P43003 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC1A3P43003 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC1A3P43003 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SLC1A3P43003 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC1A3P43003 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC1A3P43003 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC1A3P43003 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC1A3P43003 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC1A3P43003 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC1A3P43003 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC1A3P43003 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC1A3P43003 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC1A3P43003 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC1A3P43003 AC112698.1-201ENST00000510299 916 ntBASIC16.28■□□□□ 0.2
SLC1A3P43003 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms