Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
SNCAP37840 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.61□□□□□ -0.07
SNCAP37840 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 MIR3180-5-201ENST00000583743 153 ntBASIC14.61□□□□□ -0.07
SNCAP37840 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.61□□□□□ -0.07
SNCAP37840 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 LINC01126-201ENST00000623515 1646 ntBASIC14.61□□□□□ -0.07
SNCAP37840 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
SNCAP37840 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
SNCAP37840 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SNCAP37840 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNCAP37840 PCDHA14-201ENST00000506751 2298 ntBASIC14.61□□□□□ -0.07
SNCAP37840 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.6□□□□□ -0.07
SNCAP37840 AL096828.2-201ENST00000567259 1965 ntBASIC14.6□□□□□ -0.07
SNCAP37840 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SNCAP37840 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.6□□□□□ -0.07
SNCAP37840 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SNCAP37840 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.6□□□□□ -0.07
SNCAP37840 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.6□□□□□ -0.07
SNCAP37840 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.6□□□□□ -0.07
SNCAP37840 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 MIR4651-201ENST00000582622 73 ntBASIC14.6□□□□□ -0.07
SNCAP37840 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SNCAP37840 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.6□□□□□ -0.07
SNCAP37840 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SNCAP37840 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.6□□□□□ -0.07
SNCAP37840 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 AC103702.1-201ENST00000548801 2630 ntBASIC14.6□□□□□ -0.07
SNCAP37840 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.6□□□□□ -0.07
SNCAP37840 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNCAP37840 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.6□□□□□ -0.07
SNCAP37840 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.59□□□□□ -0.07
SNCAP37840 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.59□□□□□ -0.07
SNCAP37840 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNCAP37840 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNCAP37840 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNCAP37840 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms