Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PDE6BP35913 AL031598.1-201ENST00000561511 1773 ntBASIC21.66■■□□□ 1.06
PDE6BP35913 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PDE6BP35913 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.66■■□□□ 1.06
PDE6BP35913 FAM86GP-201ENST00000448322 971 ntBASIC21.66■■□□□ 1.06
PDE6BP35913 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.66■■□□□ 1.06
PDE6BP35913 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.66■■□□□ 1.06
PDE6BP35913 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 MIR4745-201ENST00000577608 62 ntBASIC21.66■■□□□ 1.06
PDE6BP35913 AC138761.1-201ENST00000584393 385 ntBASIC21.66■■□□□ 1.06
PDE6BP35913 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.66■■□□□ 1.06
PDE6BP35913 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC21.66■■□□□ 1.06
PDE6BP35913 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PDE6BP35913 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.66■■□□□ 1.06
PDE6BP35913 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PDE6BP35913 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6BP35913 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
PDE6BP35913 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.65■■□□□ 1.06
PDE6BP35913 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PDE6BP35913 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6BP35913 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6BP35913 FAM185BP-201ENST00000443595 716 ntBASIC21.65■■□□□ 1.06
PDE6BP35913 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.65■■□□□ 1.06
PDE6BP35913 AC112191.1-201ENST00000523689 701 ntBASIC21.65■■□□□ 1.06
PDE6BP35913 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PDE6BP35913 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.65■■□□□ 1.06
PDE6BP35913 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.65■■□□□ 1.06
PDE6BP35913 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.65■■□□□ 1.06
PDE6BP35913 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6BP35913 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6BP35913 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDE6BP35913 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PDE6BP35913 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6BP35913 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PDE6BP35913 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDE6BP35913 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.64■■□□□ 1.06
PDE6BP35913 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.64■■□□□ 1.05
PDE6BP35913 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
PDE6BP35913 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.64■■□□□ 1.05
PDE6BP35913 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.64■■□□□ 1.05
PDE6BP35913 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.64■■□□□ 1.05
PDE6BP35913 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.64■■□□□ 1.05
PDE6BP35913 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PDE6BP35913 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDE6BP35913 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PDE6BP35913 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PDE6BP35913 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.64■■□□□ 1.05
PDE6BP35913 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.64■■□□□ 1.05
PDE6BP35913 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 AC073592.3-201ENST00000625118 1834 ntBASIC21.64■■□□□ 1.05
PDE6BP35913 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDE6BP35913 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.64■■□□□ 1.05
PDE6BP35913 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
PDE6BP35913 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.63■■□□□ 1.05
PDE6BP35913 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE6BP35913 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.63■■□□□ 1.05
PDE6BP35913 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PDE6BP35913 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PDE6BP35913 AC006116.8-202ENST00000587620 1550 ntBASIC21.63■■□□□ 1.05
PDE6BP35913 MYCLP1-201ENST00000372451 1075 ntBASIC21.63■■□□□ 1.05
PDE6BP35913 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PDE6BP35913 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE6BP35913 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.63■■□□□ 1.05
PDE6BP35913 AC002558.1-201ENST00000488906 803 ntBASIC21.63■■□□□ 1.05
PDE6BP35913 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PDE6BP35913 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.63■■□□□ 1.05
PDE6BP35913 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.63■■□□□ 1.05
PDE6BP35913 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.63■■□□□ 1.05
PDE6BP35913 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms