Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCKBRP32239 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCKBRP32239 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCKBRP32239 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.98■□□□□ 0.31
CCKBRP32239 GPX1P2-201ENST00000429271 606 ntBASIC16.98■□□□□ 0.31
CCKBRP32239 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.98■□□□□ 0.31
CCKBRP32239 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CCKBRP32239 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CCKBRP32239 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.98■□□□□ 0.31
CCKBRP32239 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCKBRP32239 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CCKBRP32239 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CCKBRP32239 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.97■□□□□ 0.31
CCKBRP32239 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCKBRP32239 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCKBRP32239 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.97■□□□□ 0.31
CCKBRP32239 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCKBRP32239 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
CCKBRP32239 YBX2P1-201ENST00000394192 760 ntBASIC16.97■□□□□ 0.31
CCKBRP32239 RPSAP43-201ENST00000402237 625 ntBASIC16.97■□□□□ 0.31
CCKBRP32239 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.97■□□□□ 0.31
CCKBRP32239 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.97■□□□□ 0.31
CCKBRP32239 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.97■□□□□ 0.31
CCKBRP32239 AC009947.1-201ENST00000444350 727 ntBASIC16.97■□□□□ 0.31
CCKBRP32239 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.97■□□□□ 0.31
CCKBRP32239 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.97■□□□□ 0.31
CCKBRP32239 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCKBRP32239 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.97■□□□□ 0.31
CCKBRP32239 AL138781.2-201ENST00000617896 1843 ntBASIC16.97■□□□□ 0.31
CCKBRP32239 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CCKBRP32239 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CCKBRP32239 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCKBRP32239 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCKBRP32239 AC022898.2-201ENST00000616822 1312 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.96■□□□□ 0.31
CCKBRP32239 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.96■□□□□ 0.31
CCKBRP32239 AC093010.1-201ENST00000473625 1624 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCKBRP32239 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCKBRP32239 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.96■□□□□ 0.31
CCKBRP32239 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.96■□□□□ 0.31
CCKBRP32239 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.96■□□□□ 0.31
CCKBRP32239 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.96■□□□□ 0.31
CCKBRP32239 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.96■□□□□ 0.31
CCKBRP32239 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.96■□□□□ 0.31
CCKBRP32239 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCKBRP32239 SPDYE21P-201ENST00000413323 827 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 AC004832.2-201ENST00000426397 482 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.96■□□□□ 0.31
CCKBRP32239 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.96■□□□□ 0.31
CCKBRP32239 DUTP2-201ENST00000519164 463 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 MIR3687-2-201ENST00000577708 61 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 AC010327.4-202ENST00000591484 748 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 MIR3687-1-201ENST00000614492 61 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 AC055717.3-201ENST00000622967 595 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 AC005593.1-201ENST00000624894 515 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.96■□□□□ 0.31
CCKBRP32239 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.96■□□□□ 0.31
CCKBRP32239 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.96■□□□□ 0.31
CCKBRP32239 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 AL031598.1-201ENST00000561511 1773 ntBASIC16.96■□□□□ 0.31
CCKBRP32239 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCKBRP32239 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.96■□□□□ 0.3
CCKBRP32239 CROCCP3-202ENST00000420820 1947 ntBASIC16.96■□□□□ 0.3
CCKBRP32239 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCKBRP32239 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
CCKBRP32239 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCKBRP32239 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.96■□□□□ 0.3
CCKBRP32239 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.96■□□□□ 0.3
CCKBRP32239 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms