Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABRB3P28472 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.58■□□□□ 0.4
GABRB3P28472 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GABRB3P28472 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
GABRB3P28472 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
GABRB3P28472 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 AC097374.2-201ENST00000618617 1306 ntBASIC17.57■□□□□ 0.4
GABRB3P28472 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
GABRB3P28472 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.57■□□□□ 0.4
GABRB3P28472 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.57■□□□□ 0.4
GABRB3P28472 AL845331.1-201ENST00000424978 1190 ntBASIC17.57■□□□□ 0.4
GABRB3P28472 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.57■□□□□ 0.4
GABRB3P28472 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.57■□□□□ 0.4
GABRB3P28472 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.57■□□□□ 0.4
GABRB3P28472 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.57■□□□□ 0.4
GABRB3P28472 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GABRB3P28472 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.57■□□□□ 0.4
GABRB3P28472 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.57■□□□□ 0.4
GABRB3P28472 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABRB3P28472 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
GABRB3P28472 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GABRB3P28472 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.56■□□□□ 0.4
GABRB3P28472 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.56■□□□□ 0.4
GABRB3P28472 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.56■□□□□ 0.4
GABRB3P28472 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.56■□□□□ 0.4
GABRB3P28472 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.56■□□□□ 0.4
GABRB3P28472 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GABRB3P28472 AL645929.1-201ENST00000420084 975 ntBASIC17.56■□□□□ 0.4
GABRB3P28472 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.56■□□□□ 0.4
GABRB3P28472 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.56■□□□□ 0.4
GABRB3P28472 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GABRB3P28472 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.56■□□□□ 0.4
GABRB3P28472 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
GABRB3P28472 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.56■□□□□ 0.4
GABRB3P28472 AD000864.1-201ENST00000624076 2295 ntBASIC17.56■□□□□ 0.4
GABRB3P28472 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABRB3P28472 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.55■□□□□ 0.4
GABRB3P28472 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GABRB3P28472 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
GABRB3P28472 COX5BP2-201ENST00000392354 334 ntBASIC17.55■□□□□ 0.4
GABRB3P28472 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.55■□□□□ 0.4
GABRB3P28472 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.55■□□□□ 0.4
GABRB3P28472 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.55■□□□□ 0.4
GABRB3P28472 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.55■□□□□ 0.4
GABRB3P28472 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
GABRB3P28472 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.55■□□□□ 0.4
GABRB3P28472 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.55■□□□□ 0.4
GABRB3P28472 AL353801.3-201ENST00000609898 542 ntBASIC17.55■□□□□ 0.4
GABRB3P28472 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
GABRB3P28472 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.55■□□□□ 0.4
GABRB3P28472 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.55■□□□□ 0.4
GABRB3P28472 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.55■□□□□ 0.4
GABRB3P28472 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
GABRB3P28472 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABRB3P28472 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRB3P28472 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
GABRB3P28472 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GABRB3P28472 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms