Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
NFKB1P19838 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NFKB1P19838 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.01■□□□□ 0.47
NFKB1P19838 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
NFKB1P19838 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.01■□□□□ 0.47
NFKB1P19838 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.01■□□□□ 0.47
NFKB1P19838 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 AC005336.2-201ENST00000593183 939 ntBASIC18.01■□□□□ 0.47
NFKB1P19838 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.01■□□□□ 0.47
NFKB1P19838 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
NFKB1P19838 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.01■□□□□ 0.47
NFKB1P19838 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
NFKB1P19838 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NFKB1P19838 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.01■□□□□ 0.47
NFKB1P19838 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NFKB1P19838 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NFKB1P19838 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 AC091607.1-201ENST00000490318 1060 ntBASIC18■□□□□ 0.47
NFKB1P19838 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18■□□□□ 0.47
NFKB1P19838 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 AC011840.4-201ENST00000578471 627 ntBASIC18■□□□□ 0.47
NFKB1P19838 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18■□□□□ 0.47
NFKB1P19838 AL445228.2-201ENST00000605589 952 ntBASIC18■□□□□ 0.47
NFKB1P19838 CEP83-AS1-201ENST00000623122 2482 ntBASIC18■□□□□ 0.47
NFKB1P19838 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NFKB1P19838 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18■□□□□ 0.47
NFKB1P19838 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 AL645608.8-201ENST00000606034 2086 ntBASIC18■□□□□ 0.47
NFKB1P19838 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NFKB1P19838 AL138688.1-201ENST00000624851 1594 ntBASIC18■□□□□ 0.47
NFKB1P19838 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 AC097374.2-201ENST00000618617 1306 ntBASIC17.99■□□□□ 0.47
NFKB1P19838 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 AC125634.1-201ENST00000438758 1403 ntBASIC17.99■□□□□ 0.47
NFKB1P19838 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
NFKB1P19838 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NFKB1P19838 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NFKB1P19838 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NFKB1P19838 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
NFKB1P19838 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NFKB1P19838 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
NFKB1P19838 TSSC2-201ENST00000450217 709 ntBASIC17.99■□□□□ 0.47
NFKB1P19838 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.99■□□□□ 0.47
NFKB1P19838 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.99■□□□□ 0.47
NFKB1P19838 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.99■□□□□ 0.47
NFKB1P19838 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.99■□□□□ 0.47
NFKB1P19838 AC010331.1-201ENST00000611423 582 ntBASIC17.99■□□□□ 0.47
NFKB1P19838 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms