Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN1P18031 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.73■□□□□ 0.59
PTPN1P18031 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN1P18031 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PTPN1P18031 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN1P18031 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN1P18031 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.73■□□□□ 0.59
PTPN1P18031 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.73■□□□□ 0.59
PTPN1P18031 AC019129.2-201ENST00000609837 1235 ntBASIC18.73■□□□□ 0.59
PTPN1P18031 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN1P18031 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN1P18031 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTPN1P18031 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.73■□□□□ 0.59
PTPN1P18031 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.73■□□□□ 0.59
PTPN1P18031 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PTPN1P18031 KRT8P10-201ENST00000450021 1447 ntBASIC18.73■□□□□ 0.59
PTPN1P18031 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN1P18031 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTPN1P18031 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
PTPN1P18031 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
PTPN1P18031 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN1P18031 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN1P18031 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN1P18031 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN1P18031 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PTPN1P18031 AP002469.2-201ENST00000531724 424 ntBASIC18.72■□□□□ 0.59
PTPN1P18031 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 AC109462.3-201ENST00000573934 613 ntBASIC18.72■□□□□ 0.59
PTPN1P18031 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN1P18031 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTPN1P18031 TP73-AS1-207ENST00000624167 988 ntBASIC18.72■□□□□ 0.59
PTPN1P18031 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.72■□□□□ 0.59
PTPN1P18031 AC006116.8-202ENST00000587620 1550 ntBASIC18.72■□□□□ 0.59
PTPN1P18031 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN1P18031 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTPN1P18031 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.72■□□□□ 0.59
PTPN1P18031 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN1P18031 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN1P18031 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN1P18031 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTPN1P18031 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN1P18031 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN1P18031 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN1P18031 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN1P18031 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN1P18031 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN1P18031 AC009078.2-202ENST00000463353 338 ntBASIC18.71■□□□□ 0.59
PTPN1P18031 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN1P18031 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.71■□□□□ 0.59
PTPN1P18031 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.71■□□□□ 0.59
PTPN1P18031 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PTPN1P18031 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PTPN1P18031 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN1P18031 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN1P18031 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN1P18031 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN1P18031 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
PTPN1P18031 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.71■□□□□ 0.59
PTPN1P18031 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTPN1P18031 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.71■□□□□ 0.59
PTPN1P18031 AC012317.2-201ENST00000623305 2251 ntBASIC18.71■□□□□ 0.59
PTPN1P18031 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTPN1P18031 AL353593.2-201ENST00000602529 1483 ntBASIC18.71■□□□□ 0.59
PTPN1P18031 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PTPN1P18031 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PTPN1P18031 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN1P18031 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN1P18031 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
PTPN1P18031 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN1P18031 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN1P18031 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN1P18031 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
PTPN1P18031 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN1P18031 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.7■□□□□ 0.58
PTPN1P18031 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN1P18031 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN1P18031 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN1P18031 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN1P18031 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.7■□□□□ 0.58
PTPN1P18031 FAM197Y8-203ENST00000450145 560 ntBASIC18.7■□□□□ 0.58
PTPN1P18031 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.7■□□□□ 0.58
PTPN1P18031 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN1P18031 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PTPN1P18031 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.7■□□□□ 0.58
PTPN1P18031 AC073592.5-201ENST00000624854 528 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms