Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 HBZP1-201ENST00000354915 429 ntBASIC17.29■□□□□ 0.36
PCNAP12004 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.29■□□□□ 0.36
PCNAP12004 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCNAP12004 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 DUX4L26-201ENST00000489078 1255 ntBASIC17.29■□□□□ 0.36
PCNAP12004 AC063952.2-201ENST00000498792 1227 ntBASIC17.29■□□□□ 0.36
PCNAP12004 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.29■□□□□ 0.36
PCNAP12004 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.29■□□□□ 0.36
PCNAP12004 VENTXP5-201ENST00000523979 775 ntBASIC17.29■□□□□ 0.36
PCNAP12004 AC022616.7-201ENST00000525383 220 ntBASIC17.29■□□□□ 0.36
PCNAP12004 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.29■□□□□ 0.36
PCNAP12004 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.29■□□□□ 0.36
PCNAP12004 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.29■□□□□ 0.36
PCNAP12004 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.29■□□□□ 0.36
PCNAP12004 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.29■□□□□ 0.36
PCNAP12004 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCNAP12004 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCNAP12004 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNAP12004 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.28■□□□□ 0.36
PCNAP12004 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNAP12004 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PCNAP12004 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNAP12004 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCNAP12004 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.28■□□□□ 0.36
PCNAP12004 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.28■□□□□ 0.36
PCNAP12004 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.28■□□□□ 0.36
PCNAP12004 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.28■□□□□ 0.36
PCNAP12004 LINC01238-205ENST00000567549 1107 ntBASIC17.28■□□□□ 0.36
PCNAP12004 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.28■□□□□ 0.36
PCNAP12004 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCNAP12004 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.28■□□□□ 0.36
PCNAP12004 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCNAP12004 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNAP12004 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.28■□□□□ 0.36
PCNAP12004 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCNAP12004 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.28■□□□□ 0.36
PCNAP12004 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.27■□□□□ 0.36
PCNAP12004 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
PCNAP12004 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.27■□□□□ 0.36
PCNAP12004 TSPY12P-201ENST00000421279 868 ntBASIC17.27■□□□□ 0.36
PCNAP12004 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PCNAP12004 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.27■□□□□ 0.36
PCNAP12004 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.27■□□□□ 0.36
PCNAP12004 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.27■□□□□ 0.36
PCNAP12004 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.27■□□□□ 0.36
PCNAP12004 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCNAP12004 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCNAP12004 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNAP12004 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
PCNAP12004 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNAP12004 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PCNAP12004 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNAP12004 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNAP12004 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNAP12004 CROCCP1-201ENST00000426910 5675 ntBASIC17.27■□□□□ 0.35
PCNAP12004 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PCNAP12004 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCNAP12004 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCNAP12004 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCNAP12004 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms