Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.6■□□□□ 0.57
RARAP10276 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.6■□□□□ 0.57
RARAP10276 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RARAP10276 Z83836.1-201ENST00000624605 1642 ntBASIC18.6■□□□□ 0.57
RARAP10276 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
RARAP10276 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
RARAP10276 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.59■□□□□ 0.57
RARAP10276 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.59■□□□□ 0.57
RARAP10276 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.59■□□□□ 0.57
RARAP10276 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RARAP10276 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 REXO1L11P-201ENST00000620964 1927 ntBASIC18.59■□□□□ 0.57
RARAP10276 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RARAP10276 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RARAP10276 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RARAP10276 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.58■□□□□ 0.57
RARAP10276 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RARAP10276 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
RARAP10276 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RARAP10276 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RARAP10276 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RARAP10276 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RARAP10276 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.58■□□□□ 0.56
RARAP10276 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.58■□□□□ 0.56
RARAP10276 AC068472.1-201ENST00000474589 881 ntBASIC18.58■□□□□ 0.56
RARAP10276 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.58■□□□□ 0.56
RARAP10276 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.58■□□□□ 0.56
RARAP10276 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.58■□□□□ 0.56
RARAP10276 AC116407.2-201ENST00000613639 860 ntBASIC18.58■□□□□ 0.56
RARAP10276 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 HLA-J-201ENST00000462773 1622 ntBASIC18.58■□□□□ 0.56
RARAP10276 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.58■□□□□ 0.56
RARAP10276 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.58■□□□□ 0.56
RARAP10276 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.58■□□□□ 0.56
RARAP10276 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
RARAP10276 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.58■□□□□ 0.56
RARAP10276 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RARAP10276 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RARAP10276 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RARAP10276 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RARAP10276 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.57■□□□□ 0.56
RARAP10276 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.57■□□□□ 0.56
RARAP10276 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
RARAP10276 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.57■□□□□ 0.56
RARAP10276 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RARAP10276 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.57■□□□□ 0.56
RARAP10276 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.57■□□□□ 0.56
RARAP10276 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RARAP10276 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RARAP10276 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RARAP10276 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.56■□□□□ 0.56
RARAP10276 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.56■□□□□ 0.56
RARAP10276 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms