Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 CROCCP2-202ENST00000412962 2773 ntBASIC15.56■□□□□ 0.08
UBCP0CG48 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
UBCP0CG48 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.56■□□□□ 0.08
UBCP0CG48 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.56■□□□□ 0.08
UBCP0CG48 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
UBCP0CG48 MMP23A-201ENST00000234610 1017 ntBASIC15.56■□□□□ 0.08
UBCP0CG48 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.56■□□□□ 0.08
UBCP0CG48 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.56■□□□□ 0.08
UBCP0CG48 ECEL1P3-201ENST00000427961 737 ntBASIC15.56■□□□□ 0.08
UBCP0CG48 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.56■□□□□ 0.08
UBCP0CG48 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.56■□□□□ 0.08
UBCP0CG48 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.56■□□□□ 0.08
UBCP0CG48 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
UBCP0CG48 KRT89P-201ENST00000620027 1478 ntBASIC15.56■□□□□ 0.08
UBCP0CG48 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
UBCP0CG48 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.56■□□□□ 0.08
UBCP0CG48 AC009949.1-201ENST00000623048 1830 ntBASIC15.56■□□□□ 0.08
UBCP0CG48 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.56■□□□□ 0.08
UBCP0CG48 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.56■□□□□ 0.08
UBCP0CG48 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
UBCP0CG48 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.55■□□□□ 0.08
UBCP0CG48 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.55■□□□□ 0.08
UBCP0CG48 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.55■□□□□ 0.08
UBCP0CG48 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 AP001094.4-201ENST00000579008 2176 ntBASIC15.55■□□□□ 0.08
UBCP0CG48 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.55■□□□□ 0.08
UBCP0CG48 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.55■□□□□ 0.08
UBCP0CG48 ECEL1P2-202ENST00000465689 757 ntBASIC15.55■□□□□ 0.08
UBCP0CG48 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.55■□□□□ 0.08
UBCP0CG48 MIR4497-201ENST00000583208 89 ntBASIC15.55■□□□□ 0.08
UBCP0CG48 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.55■□□□□ 0.08
UBCP0CG48 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.55■□□□□ 0.08
UBCP0CG48 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.55■□□□□ 0.08
UBCP0CG48 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.55■□□□□ 0.08
UBCP0CG48 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 AC018695.7-201ENST00000624587 2492 ntBASIC15.55■□□□□ 0.08
UBCP0CG48 AL118508.1-201ENST00000613502 2345 ntBASIC15.55■□□□□ 0.08
UBCP0CG48 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
UBCP0CG48 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
UBCP0CG48 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.54■□□□□ 0.08
UBCP0CG48 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UBCP0CG48 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.54■□□□□ 0.08
UBCP0CG48 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
UBCP0CG48 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.54■□□□□ 0.08
UBCP0CG48 KRT8P9-201ENST00000558927 1449 ntBASIC15.54■□□□□ 0.08
UBCP0CG48 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
UBCP0CG48 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
UBCP0CG48 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.54■□□□□ 0.08
UBCP0CG48 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
UBCP0CG48 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
UBCP0CG48 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
UBCP0CG48 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms