Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MYCNP04198 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MYCNP04198 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MYCNP04198 AC098831.1-202ENST00000438821 336 ntBASIC20.33■□□□□ 0.85
MYCNP04198 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.33■□□□□ 0.85
MYCNP04198 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
MYCNP04198 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC20.33■□□□□ 0.85
MYCNP04198 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
MYCNP04198 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.33■□□□□ 0.85
MYCNP04198 AC009533.2-201ENST00000543664 586 ntBASIC20.33■□□□□ 0.85
MYCNP04198 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MYCNP04198 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.33■□□□□ 0.85
MYCNP04198 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MYCNP04198 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.33■□□□□ 0.84
MYCNP04198 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
MYCNP04198 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
MYCNP04198 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MYCNP04198 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.33■□□□□ 0.84
MYCNP04198 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.33■□□□□ 0.84
MYCNP04198 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
MYCNP04198 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MYCNP04198 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MYCNP04198 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MYCNP04198 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MYCNP04198 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.33■□□□□ 0.84
MYCNP04198 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MYCNP04198 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
MYCNP04198 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MYCNP04198 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.32■□□□□ 0.84
MYCNP04198 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
MYCNP04198 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC20.32■□□□□ 0.84
MYCNP04198 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MYCNP04198 OR51A6P-201ENST00000418680 1004 ntBASIC20.32■□□□□ 0.84
MYCNP04198 AL391863.1-201ENST00000422776 743 ntTSL 3 BASIC20.32■□□□□ 0.84
MYCNP04198 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.32■□□□□ 0.84
MYCNP04198 PGAM5P1-201ENST00000518923 814 ntBASIC20.32■□□□□ 0.84
MYCNP04198 OR7E14P-202ENST00000530490 1290 ntBASIC20.32■□□□□ 0.84
MYCNP04198 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
MYCNP04198 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 FP565260.4-201ENST00000624081 513 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MYCNP04198 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.32■□□□□ 0.84
MYCNP04198 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.32■□□□□ 0.84
MYCNP04198 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
MYCNP04198 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MYCNP04198 AC005332.8-201ENST00000622750 2735 ntBASIC20.32■□□□□ 0.84
MYCNP04198 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MYCNP04198 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MYCNP04198 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MYCNP04198 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.31■□□□□ 0.84
MYCNP04198 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.31■□□□□ 0.84
MYCNP04198 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.31■□□□□ 0.84
MYCNP04198 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MYCNP04198 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.31■□□□□ 0.84
MYCNP04198 AL353626.3-201ENST00000413399 657 ntBASIC20.31■□□□□ 0.84
MYCNP04198 AC002076.1-201ENST00000435257 527 ntTSL 2 BASIC20.31■□□□□ 0.84
MYCNP04198 MTND1P31-201ENST00000449206 961 ntBASIC20.31■□□□□ 0.84
MYCNP04198 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC20.31■□□□□ 0.84
MYCNP04198 AC098826.2-201ENST00000452011 651 ntBASIC20.31■□□□□ 0.84
MYCNP04198 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.31■□□□□ 0.84
MYCNP04198 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.31■□□□□ 0.84
MYCNP04198 ZNF506-204ENST00000545006 1007 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC20.31■□□□□ 0.84
MYCNP04198 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.31■□□□□ 0.84
MYCNP04198 AC008687.5-201ENST00000593746 558 ntBASIC20.31■□□□□ 0.84
MYCNP04198 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC20.31■□□□□ 0.84
MYCNP04198 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.31■□□□□ 0.84
MYCNP04198 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
MYCNP04198 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.31■□□□□ 0.84
MYCNP04198 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 LINC00602-201ENST00000629776 2065 ntBASIC20.31■□□□□ 0.84
MYCNP04198 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MYCNP04198 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms