Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 AC027601.4-201ENST00000611259 610 ntBASIC16.57■□□□□ 0.24
PDGFAP04085 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
PDGFAP04085 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PDGFAP04085 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PDGFAP04085 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFAP04085 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.56■□□□□ 0.24
PDGFAP04085 ABCD1P5-201ENST00000445663 754 ntBASIC16.56■□□□□ 0.24
PDGFAP04085 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PDGFAP04085 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PDGFAP04085 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.56■□□□□ 0.24
PDGFAP04085 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFAP04085 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PDGFAP04085 AC010327.4-202ENST00000591484 748 ntBASIC16.56■□□□□ 0.24
PDGFAP04085 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFAP04085 AC025062.2-201ENST00000605477 670 ntBASIC16.56■□□□□ 0.24
PDGFAP04085 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFAP04085 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.56■□□□□ 0.24
PDGFAP04085 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFAP04085 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFAP04085 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.56■□□□□ 0.24
PDGFAP04085 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.56■□□□□ 0.24
PDGFAP04085 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PDGFAP04085 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDGFAP04085 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 LINC00602-201ENST00000629776 2065 ntBASIC16.55■□□□□ 0.24
PDGFAP04085 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
PDGFAP04085 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFAP04085 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDGFAP04085 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFAP04085 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFAP04085 HCG11-201ENST00000411553 5696 ntBASIC16.55■□□□□ 0.24
PDGFAP04085 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFAP04085 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PDGFAP04085 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.55■□□□□ 0.24
PDGFAP04085 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFAP04085 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFAP04085 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFAP04085 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.55■□□□□ 0.24
PDGFAP04085 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.55■□□□□ 0.24
PDGFAP04085 AC008687.5-201ENST00000593746 558 ntBASIC16.55■□□□□ 0.24
PDGFAP04085 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PDGFAP04085 FAM197Y3-203ENST00000618346 717 ntBASIC16.55■□□□□ 0.24
PDGFAP04085 AC009154.2-201ENST00000621177 724 ntBASIC16.55■□□□□ 0.24
PDGFAP04085 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDGFAP04085 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDGFAP04085 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDGFAP04085 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms