Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-ND1P03886 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MT-ND1P03886 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-ND1P03886 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
MT-ND1P03886 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.73■□□□□ 0.27
MT-ND1P03886 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.73■□□□□ 0.27
MT-ND1P03886 AL023803.3-201ENST00000615559 522 ntBASIC16.73■□□□□ 0.27
MT-ND1P03886 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-ND1P03886 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-ND1P03886 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MT-ND1P03886 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-ND1P03886 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.73■□□□□ 0.27
MT-ND1P03886 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
MT-ND1P03886 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
MT-ND1P03886 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
MT-ND1P03886 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.72■□□□□ 0.27
MT-ND1P03886 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 TSPY17P-201ENST00000450329 467 ntBASIC16.72■□□□□ 0.27
MT-ND1P03886 RBM17P1-201ENST00000453646 1190 ntBASIC16.72■□□□□ 0.27
MT-ND1P03886 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.72■□□□□ 0.27
MT-ND1P03886 AC008550.1-201ENST00000511500 884 ntBASIC16.72■□□□□ 0.27
MT-ND1P03886 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-ND1P03886 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.72■□□□□ 0.27
MT-ND1P03886 AL353719.1-201ENST00000566847 864 ntBASIC16.72■□□□□ 0.27
MT-ND1P03886 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.72■□□□□ 0.27
MT-ND1P03886 MIR4785-201ENST00000585005 73 ntBASIC16.72■□□□□ 0.27
MT-ND1P03886 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.72■□□□□ 0.27
MT-ND1P03886 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 AC060834.1-201ENST00000443027 2032 ntBASIC16.72■□□□□ 0.27
MT-ND1P03886 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.72■□□□□ 0.27
MT-ND1P03886 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MT-ND1P03886 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MT-ND1P03886 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-ND1P03886 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MT-ND1P03886 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-ND1P03886 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MT-ND1P03886 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
MT-ND1P03886 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.71■□□□□ 0.27
MT-ND1P03886 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.71■□□□□ 0.27
MT-ND1P03886 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.71■□□□□ 0.27
MT-ND1P03886 AP003041.3-201ENST00000527151 707 ntBASIC16.71■□□□□ 0.27
MT-ND1P03886 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.71■□□□□ 0.27
MT-ND1P03886 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
MT-ND1P03886 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MT-ND1P03886 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms