Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.69■□□□□ 0.1
APOC1P02654 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.69■□□□□ 0.1
APOC1P02654 AL596257.1-201ENST00000641463 2694 ntBASIC15.69■□□□□ 0.1
APOC1P02654 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
APOC1P02654 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
APOC1P02654 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 KRT18P65-201ENST00000439811 1286 ntBASIC15.69■□□□□ 0.1
APOC1P02654 BX664615.1-201ENST00000443558 458 ntBASIC15.69■□□□□ 0.1
APOC1P02654 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.69■□□□□ 0.1
APOC1P02654 RASA4DP-201ENST00000460726 1199 ntBASIC15.69■□□□□ 0.1
APOC1P02654 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
APOC1P02654 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
APOC1P02654 AC005363.2-201ENST00000618631 242 ntBASIC15.69■□□□□ 0.1
APOC1P02654 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
APOC1P02654 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
APOC1P02654 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
APOC1P02654 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.69■□□□□ 0.1
APOC1P02654 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.69■□□□□ 0.1
APOC1P02654 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
APOC1P02654 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
APOC1P02654 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
APOC1P02654 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
APOC1P02654 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
APOC1P02654 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
APOC1P02654 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.68■□□□□ 0.1
APOC1P02654 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
APOC1P02654 LINC00167-201ENST00000530583 1419 ntBASIC15.68■□□□□ 0.1
APOC1P02654 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.68■□□□□ 0.1
APOC1P02654 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
APOC1P02654 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.68■□□□□ 0.1
APOC1P02654 AL162727.3-201ENST00000635661 2787 ntBASIC15.68■□□□□ 0.1
APOC1P02654 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
APOC1P02654 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 AL137013.1-201ENST00000432946 1228 ntBASIC15.68■□□□□ 0.1
APOC1P02654 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.68■□□□□ 0.1
APOC1P02654 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.68■□□□□ 0.1
APOC1P02654 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 AC073912.3-201ENST00000624414 853 ntBASIC15.68■□□□□ 0.1
APOC1P02654 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.68■□□□□ 0.1
APOC1P02654 LINC00896-202ENST00000609602 2128 ntBASIC15.68■□□□□ 0.1
APOC1P02654 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
APOC1P02654 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.68■□□□□ 0.1
APOC1P02654 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
APOC1P02654 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
APOC1P02654 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.67■□□□□ 0.1
APOC1P02654 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.67■□□□□ 0.1
APOC1P02654 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
APOC1P02654 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms