Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.69■□□□□ 0.42
CBX6O95503 Z85996.1-201ENST00000494644 937 ntBASIC17.69■□□□□ 0.42
CBX6O95503 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX6O95503 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.69■□□□□ 0.42
CBX6O95503 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.69■□□□□ 0.42
CBX6O95503 AC130371.2-201ENST00000619443 611 ntBASIC17.69■□□□□ 0.42
CBX6O95503 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CBX6O95503 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX6O95503 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CBX6O95503 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX6O95503 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX6O95503 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX6O95503 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CBX6O95503 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.68■□□□□ 0.42
CBX6O95503 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX6O95503 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.68■□□□□ 0.42
CBX6O95503 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CBX6O95503 KRT18P56-201ENST00000507275 550 ntBASIC17.68■□□□□ 0.42
CBX6O95503 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.68■□□□□ 0.42
CBX6O95503 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CBX6O95503 SLC25A1P4-201ENST00000567977 778 ntBASIC17.68■□□□□ 0.42
CBX6O95503 AC139887.4-201ENST00000607877 719 ntBASIC17.68■□□□□ 0.42
CBX6O95503 AL138966.2-201ENST00000621997 464 ntBASIC17.68■□□□□ 0.42
CBX6O95503 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CBX6O95503 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.68■□□□□ 0.42
CBX6O95503 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.68■□□□□ 0.42
CBX6O95503 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
CBX6O95503 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CBX6O95503 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.68■□□□□ 0.42
CBX6O95503 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CBX6O95503 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
CBX6O95503 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX6O95503 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CBX6O95503 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
CBX6O95503 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.67■□□□□ 0.42
CBX6O95503 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CBX6O95503 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CBX6O95503 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX6O95503 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.67■□□□□ 0.42
CBX6O95503 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.67■□□□□ 0.42
CBX6O95503 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.67■□□□□ 0.42
CBX6O95503 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX6O95503 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 KRT126P-201ENST00000549467 1181 ntBASIC17.67■□□□□ 0.42
CBX6O95503 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
CBX6O95503 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.67■□□□□ 0.42
CBX6O95503 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CBX6O95503 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CBX6O95503 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX6O95503 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.67■□□□□ 0.42
CBX6O95503 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
CBX6O95503 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.67■□□□□ 0.42
CBX6O95503 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CBX6O95503 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.67■□□□□ 0.42
CBX6O95503 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX6O95503 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX6O95503 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CBX6O95503 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CBX6O95503 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms